RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 PIK3R1P27986 724 aa18.03■□□□□ 0.48
MCF2L-221ENST00000469415 PEX2P28328 305 aa18.03■□□□□ 0.48
MCF2L-221ENST00000469415 CDH13P55290 713 aa18.03■□□□□ 0.48
MCF2L-221ENST00000469415 RAB10P61026 200 aa18.03■□□□□ 0.48
MCF2L-221ENST00000469415 SLC12A1Q13621 1099 aa18.03■□□□□ 0.48
MCF2L-221ENST00000469415 MGAT5BQ3V5L5 792 aa18.03■□□□□ 0.48
MCF2L-221ENST00000469415 C10orf120Q5SQS8 335 aa18.03■□□□□ 0.48
MCF2L-221ENST00000469415 LINC00523Q86TU6 105 aa18.03■□□□□ 0.48
MCF2L-221ENST00000469415 PCDH20Q8N6Y1 951 aaKnown RBP18.03■□□□□ 0.48
MCF2L-221ENST00000469415 PGAP3Q96FM1 320 aaPredicted RBP18.03■□□□□ 0.48
MCF2L-221ENST00000469415 RPRD1AQ96P16 312 aaPredicted RBP18.03■□□□□ 0.48
MCF2L-221ENST00000469415 VAT1Q99536 393 aa18.03■□□□□ 0.48
MCF2L-221ENST00000469415 KIFC1Q9BW19 673 aa18.03■□□□□ 0.48
MCF2L-221ENST00000469415 DNAJC28Q9NX36 388 aa18.03■□□□□ 0.48
MCF2L-221ENST00000469415 MAGEB16A2A368 324 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 ERI2A8K979 691 aaKnown RBP18.02■□□□□ 0.48
MCF2L-221ENST00000469415 MATN3O15232 486 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 LINGO3P0C6S8 592 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 CCDC166P0CW27 439 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 PRKAR2AP13861 404 aaKnown RBP18.02■□□□□ 0.48
MCF2L-221ENST00000469415 ARSDP51689 593 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 NAB1Q13506 487 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 IHHQ14623 411 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 CLEC14AQ86T13 490 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 TXNDC5Q8NBS9 432 aaKnown RBP18.02■□□□□ 0.48
MCF2L-221ENST00000469415 PHC3Q8NDX5 983 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 OLFM1Q99784 485 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 ADAMTS6Q9UKP5 1117 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 ADAM28Q9UKQ2 775 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 TADA2AO75478 443 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 CCNCP24863 283 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 AIF1P55008 147 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 CCNIQ14094 377 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 GEN1Q17RS7 908 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 LIPMQ5VYY2 423 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 OR52K2Q8NGK3 314 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 BHMTQ93088 406 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 HDAC10Q969S8 669 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 MYEOVQ96EZ4 313 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 TNFRSF12AQ9NP84 129 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 BATF3Q9NR55 127 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 ARHGAP26Q9UNA1 814 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 NEU3Q9UQ49 428 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 TCAF1Q9Y4C2 921 aa18.02■□□□□ 0.48
MCF2L-221ENST00000469415 CPB1P15086 417 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 ACVRL1P37023 503 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 CD151P48509 253 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 CDK7P50613 346 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 MRPS22P82650 360 aaKnown RBP18.01■□□□□ 0.47
MCF2L-221ENST00000469415 GALNT3Q14435 633 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 PPP1R3AQ16821 1122 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 FAM171A1Q5VUB5 890 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 CLEC6AQ6EIG7 209 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 GLB1LQ6UWU2 654 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 RTN4RL1Q86UN2 441 aaPredicted RBP18.01■□□□□ 0.47
MCF2L-221ENST00000469415 TMEM151AQ8N4L1 468 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 IGSF8Q969P0 613 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 SLC45A3Q96JT2 553 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 FAM193BQ96PV7 902 aaPredicted RBP18.01■□□□□ 0.47
MCF2L-221ENST00000469415 SPON2Q9BUD6 331 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 C1QTNF1Q9BXJ1 281 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 EBF3Q9H4W6 596 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 PIDD1Q9HB75 910 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 GPAMQ9HCL2 828 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 HDAC3O15379 428 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 ACADSP16219 412 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 TBX4P57082 545 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 FSCBQ5H9T9 825 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 MYLK4Q86YV6 388 aaPredicted RBP18.01■□□□□ 0.47
MCF2L-221ENST00000469415 ALG9Q9H6U8 611 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 UXTQ9UBK9 157 aaPredicted RBP18.01■□□□□ 0.47
MCF2L-221ENST00000469415 GIMAP2Q9UG22 337 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 ANKRD12Q6UB98 2062 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 SLC12A8A0AV02 714 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 GRID2O43424 1007 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 TSPAN3O60637 253 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 GEMP55040 296 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 CSE1LP55060 971 aaKnown RBP18.01■□□□□ 0.47
MCF2L-221ENST00000469415 PRAMEP78395 509 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 STXBP5Q5T5C0 1151 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 GK5Q6ZS86 529 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 TRIM67Q6ZTA4 783 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 LSMEM2Q8N112 164 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 ANKRD49Q8WVL7 239 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 SOCS4Q8WXH5 440 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 FCRL5Q96RD9 977 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 NOL6Q9H6R4 1146 aaKnown RBP18.01■□□□□ 0.47
MCF2L-221ENST00000469415 S100A14Q9HCY8 104 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 RRN3Q9NYV6 651 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 MARCH4Q9P2E8 410 aaPredicted RBP18.01■□□□□ 0.47
MCF2L-221ENST00000469415 ZNF212Q9UDV6 495 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 LRCH1Q9Y2L9 728 aa18.01■□□□□ 0.47
MCF2L-221ENST00000469415 MANSC4A6NHS7 340 aaPredicted RBP18■□□□□ 0.47
MCF2L-221ENST00000469415 GOLGA8CPA6NN73 597 aa18■□□□□ 0.47
MCF2L-221ENST00000469415 MATN2O00339 956 aa18■□□□□ 0.47
MCF2L-221ENST00000469415 TRPA1O75762 1119 aa18■□□□□ 0.47
MCF2L-221ENST00000469415 CYBAP13498 195 aa18■□□□□ 0.47
MCF2L-221ENST00000469415 ARCN1P48444 511 aaKnown RBP18■□□□□ 0.47
MCF2L-221ENST00000469415 GRIK3Q13003 919 aa18■□□□□ 0.47
MCF2L-221ENST00000469415 CDC16Q13042 620 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms