RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 DCAF4Q8WV16 495 aa9.12□□□□□ -0.95
SMARCE1-207ENST00000469334 HDAC2Q92769 488 aaKnown RBP9.12□□□□□ -0.95
SMARCE1-207ENST00000469334 AGAP4Q96P64 663 aa9.12□□□□□ -0.95
SMARCE1-207ENST00000469334 AMNQ9BXJ7 453 aa9.12□□□□□ -0.95
SMARCE1-207ENST00000469334 IRF2BPLQ9H1B7 796 aa9.12□□□□□ -0.95
SMARCE1-207ENST00000469334 MUC13Q9H3R2 512 aa9.12□□□□□ -0.95
SMARCE1-207ENST00000469334 WDR55Q9H6Y2 383 aaPredicted RBP9.12□□□□□ -0.95
SMARCE1-207ENST00000469334 TBC1D13Q9NVG8 400 aa9.12□□□□□ -0.95
SMARCE1-207ENST00000469334 INTS10Q9NVR2 710 aaKnown RBP9.12□□□□□ -0.95
SMARCE1-207ENST00000469334 CACNA2D2Q9NY47 1150 aa9.12□□□□□ -0.95
SMARCE1-207ENST00000469334 WARS2Q9UGM6 360 aaKnown RBP9.12□□□□□ -0.95
SMARCE1-207ENST00000469334 MOSPD1Q9UJG1 213 aa9.12□□□□□ -0.95
SMARCE1-207ENST00000469334 SPEF1Q9Y4P9 236 aa9.12□□□□□ -0.95
SMARCE1-207ENST00000469334 PCDHB4Q9Y5E5 795 aa9.12□□□□□ -0.95
SMARCE1-207ENST00000469334 DGKBQ9Y6T7 804 aa9.12□□□□□ -0.95
SMARCE1-207ENST00000469334 TEX51A0A1B0GUA7 166 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 PRORSD1PA6NEY8 169 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 TRPC5OSA6NMA1 111 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 SNTNA6NMZ2 147 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 TCP10L2B9ZVM9 353 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 G3V2L1 256 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 M0R3G1 203 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 NEMP1O14524 444 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 GRID2O43424 1007 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 TSPAN1O60635 241 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 GPC4O75487 556 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 AMHP03971 560 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 MPOP05164 745 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 GPIP06744 558 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 NAGAP17050 411 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 PSMA2P25787 234 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 TYK2P29597 1187 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 MRPS15P82914 257 aaKnown RBP9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 GALK2Q01415 458 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 CLCQ05315 142 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 CUL2Q13617 745 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 SQLEQ14534 574 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 UBE2UQ5VVX9 321 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 REP15Q6BDI9 236 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 C8orf82Q6P1X6 216 aaPredicted RBP9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 PRMT9Q6P2P2 845 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 NEK5Q6P3R8 708 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 OFCC1Q8IZS5 231 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 CLYBLQ8N0X4 340 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 ANKRD52Q8NB46 1076 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 TMEM35BQ8NCS4 154 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 PEX13Q92968 403 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 PGBD4Q96DM1 585 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 SLC10A4Q96EP9 437 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 NGLY1Q96IV0 654 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 DEPDC7Q96QD5 511 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 P2RX7Q99572 595 aaKnown RBP9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 LXNQ9BS40 222 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 KIFC3Q9BVG8 833 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 CHID1Q9BWS9 393 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 DNAI2Q9GZS0 605 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 MKRN2Q9H000 416 aaKnown RBP9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 LRRC40Q9H9A6 602 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 HPS4Q9NQG7 708 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 PAK1IP1Q9NWT1 392 aaPredicted RBP9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 SYBUQ9NX95 663 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 ZNF639Q9UID6 485 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 COL5A2P05997 1499 aaPredicted RBP9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 IRS2Q9Y4H2 1338 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 BCLAF3A2AJT9 711 aaKnown RBP9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 H7C0C1 242 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 AP3B1O00203 1094 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 PIK3R2O00459 728 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 ZBTB39O15060 712 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 SHOXO15266 292 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 ZW10O43264 779 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 LRCH4O75427 683 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 KCNK2O95069 426 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 DLGAP3O95886 979 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 ALBP02768 609 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 MYL3P08590 195 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 CFHP08603 1231 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 MLNP12872 115 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 CD1EP15812 388 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 MPSTP25325 297 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 ATP5OP48047 213 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 TAGLNQ01995 201 aaKnown RBP9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 GABPAQ06546 454 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 POLD3Q15054 466 aaPredicted RBP9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 FXNQ16595 210 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 SMU1Q2TAY7 513 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 GLRA4Q5JXX5 417 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 LCN8Q6JVE9 175 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 CYP2R1Q6VVX0 501 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 NAPRTQ6XQN6 538 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 PIWIL3Q7Z3Z3 882 aaKnown RBP9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 MAP4K3Q8IVH8 894 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 DDIASQ8IXT1 998 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 LGI2Q8N0V4 545 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 SPARTQ8N0X7 666 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 FAM109AQ8N4B1 249 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 KCTD6Q8NC69 237 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 SHCBP1Q8NEM2 672 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 POMGNT1Q8WZA1 660 aa9.11□□□□□ -0.95
SMARCE1-207ENST00000469334 MARVELD3Q96A59 401 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms