RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 GDF3Q9NR23 364 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 DONSONQ9NYP3 566 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 PCOLCE2Q9UKZ9 415 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 TPX2Q9ULW0 747 aaKnown RBP11.71□□□□□ -0.53
CDHR3-205ENST00000468143 DMTF1Q9Y222 760 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 A0A1B0GTQ1 180 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 IGLON5A6NGN9 336 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 GOLGA8CPA6NN73 597 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 AKR1B15C9JRZ8 316 aaPredicted RBP11.7□□□□□ -0.54
CDHR3-205ENST00000468143 NEMP1O14524 444 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 CBFA2T3O75081 653 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 PALMO75781 387 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 CD48P09326 243 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 H2AFZP0C0S5 128 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 ZNF883P0CG24 379 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 RGRP47804 291 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 CCT8P50990 548 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 CDH6P55285 790 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 SLC25A11Q02978 314 aaKnown RBP11.7□□□□□ -0.54
CDHR3-205ENST00000468143 RAD51Q06609 339 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 BNIP3Q12983 259 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 MMRN1Q13201 1228 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 FGL2Q14314 439 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 KRT81Q14533 505 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 SHBQ15464 509 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 DPYSL2Q16555 572 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 DBX2Q6ZNG2 339 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 H2AFVQ71UI9 128 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 NIPA2Q8N8Q9 360 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 TSEN2Q8NCE0 465 aaKnown RBP11.7□□□□□ -0.54
CDHR3-205ENST00000468143 KLHDC7BQ96G42 594 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 LRIG1Q96JA1 1093 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 CCDC42Q96M95 316 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 CSPG4P5Q96PW8 444 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 SLC17A9Q9BYT1 436 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 RBSNQ9H1K0 784 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 CAAP1Q9H8G2 361 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 SP110Q9HB58 689 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 PCDH18Q9HCL0 1135 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 KLHL11Q9NVR0 708 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 IPO11Q9UI26 975 aaKnown RBP11.7□□□□□ -0.54
CDHR3-205ENST00000468143 ANGPTL2Q9UKU9 493 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 DOCK4Q8N1I0 1966 aa11.7□□□□□ -0.54
CDHR3-205ENST00000468143 SSU72P8A0A1W2PR75 194 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 TTC24A2A3L6 582 aaPredicted RBP11.69□□□□□ -0.54
CDHR3-205ENST00000468143 RAD51BO15315 384 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 FLRT2O43155 660 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 SPINT1O43278 529 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 HYAL3O43820 417 aaPredicted RBP11.69□□□□□ -0.54
CDHR3-205ENST00000468143 BUB1BO60566 1050 aaPredicted RBP11.69□□□□□ -0.54
CDHR3-205ENST00000468143 PROSCO94903 275 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 THEGLP0DJG4 465 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 TIMP2P16035 220 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 HNRNPA2B1P22626 353 aaKnown RBP11.69□□□□□ -0.54
CDHR3-205ENST00000468143 AKT2P31751 481 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 NUDT1P36639 197 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 ZNF135P52742 658 aaPredicted RBP11.69□□□□□ -0.54
CDHR3-205ENST00000468143 TAS2R40P59535 323 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 RPS21P63220 83 aaKnown RBP11.69□□□□□ -0.54
CDHR3-205ENST00000468143 SEMG2Q02383 582 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 TBX2Q13207 712 aaPredicted RBP11.69□□□□□ -0.54
CDHR3-205ENST00000468143 SGCGQ13326 291 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 HNRNPDQ14103 355 aaKnown RBP11.69□□□□□ -0.54
CDHR3-205ENST00000468143 MESDQ14696 234 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 HADHQ16836 314 aaKnown RBP11.69□□□□□ -0.54
CDHR3-205ENST00000468143 TMEM259Q4ZIN3 620 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 TMCO3Q6UWJ1 677 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 KDM7AQ6ZMT4 941 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 CAMK1DQ8IU85 385 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 CHCHD4Q8N4Q1 142 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 TMEM145Q8NBT3 493 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 OR13H1Q8NG92 308 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 TEKT4Q8WW24 435 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 BMFQ96LC9 184 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 CINPQ9BW66 212 aaPredicted RBP11.69□□□□□ -0.54
CDHR3-205ENST00000468143 OSBPL1AQ9BXW6 950 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 PCDHGB2Q9Y5G2 931 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 PLXNA2O75051 1894 aa11.69□□□□□ -0.54
CDHR3-205ENST00000468143 NYNRINQ9P2P1 1898 aaKnown RBP11.69□□□□□ -0.54
CDHR3-205ENST00000468143 MUSKO15146 869 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 TSPAN6O43657 245 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 AP1G1O43747 822 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 PCDHGA12O60330 932 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 DFNA5O60443 496 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 MMP20O60882 483 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 SDC3O75056 442 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 PRKCGP05129 697 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 ITGAVP06756 1048 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 ATXN1LP0C7T5 689 aaKnown RBP11.68□□□□□ -0.54
CDHR3-205ENST00000468143 TMEM253P0C7T8 217 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 FTH1P19P0C7X4 201 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 XPAP23025 273 aaPredicted RBP11.68□□□□□ -0.54
CDHR3-205ENST00000468143 IL4RP24394 825 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 IL10RBQ08334 325 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 SLC10A7Q0GE19 358 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 LBRQ14739 615 aaKnown RBP11.68□□□□□ -0.54
CDHR3-205ENST00000468143 CCDC157Q569K6 752 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 ZFYVE27Q5T4F4 411 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 KIAA1161Q6NSJ0 714 aa11.68□□□□□ -0.54
CDHR3-205ENST00000468143 SARM1Q6SZW1 724 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms