RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 TRIM61Q5EBN2 209 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 RALGPS1Q5JS13 557 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 ALG1LQ6GMV1 187 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 TCEAL6Q6IPX3 200 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 MFSD7Q6UXD7 560 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 GDPD4Q6W3E5 623 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 PARS2Q7L3T8 475 aaKnown RBP9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 DAAM2Q86T65 1068 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 KIAA1328Q86T90 577 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 SRLQ86TD4 932 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 ZSCAN30Q86W11 494 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 LRRC8AQ8IWT6 810 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 ATPAF2Q8N5M1 289 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 RNF10Q8N5U6 811 aaKnown RBP9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 TSEN2Q8NCE0 465 aaKnown RBP9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 OR14C36Q8NHC7 312 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 EXD1Q8NHP7 514 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 GRIN3AQ8TCU5 1115 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 GANCQ8TET4 914 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 UBE2Q2Q8WVN8 375 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 TCEAL3Q969E4 200 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 RAB7BQ96AH8 199 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 HDAC11Q96DB2 347 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 ECHDC3Q96DC8 303 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 ZNF641Q96N77 438 aaPredicted RBP9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 OLFM3Q96PB7 478 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 MGME1Q9BQP7 344 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 DESI2Q9BSY9 194 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 GOLPH3Q9H4A6 298 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 SMOC1Q9H4F8 434 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 ZDHHC6Q9H6R6 413 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 EBF2Q9HAK2 575 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 DYRK4Q9NR20 520 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 DLL3Q9NYJ7 618 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 DTLQ9NZJ0 730 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 AMACRQ9UHK6 382 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 SLC6A14Q9UN76 642 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 PCDHA3Q9Y5H8 950 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 FADS3Q9Y5Q0 445 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 TRPM6Q9BX84 2022 aa9.6□□□□□ -0.87
SDCCAG3-208ENST00000466579 A0A0U1RQJ8 604 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 C16orf96A6NNT2 1141 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 KRIT1O00522 736 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 TRAFD1O14545 582 aaPredicted RBP9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 AREL1O15033 823 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 MATN3O15232 486 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 BCAT2O15382 392 aaPredicted RBP9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 INSIG1O15503 277 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 UGT2B4P06133 528 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 GNSP15586 552 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 MAOBP27338 520 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 PTPN7P35236 360 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 MAPK8P45983 427 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 MARCKSL1P49006 195 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 PEX5P50542 639 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 COPS2P61201 443 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 AP1S1P61966 158 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 PPP2CBP62714 309 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 PPP2CAP67775 309 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 IRX4P78413 519 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 CCZ1BP86790 482 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 CCZ1P86791 482 aaPredicted RBP9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 PPIDQ08752 370 aaKnown RBP9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 KIF5AQ12840 1032 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 PPP2R5EQ16537 467 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 POM121L1PQ3SYA9 428 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 TMEM259Q4ZIN3 620 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 TIGD7Q6NT04 549 aaPredicted RBP9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 SPOCD1Q6ZMY3 1216 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 NT5DC3Q86UY8 548 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 RCOR2Q8IZ40 523 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 PGBD5Q8N414 524 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 OR6K2Q8NGY2 324 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 KIAA1524Q8TCG1 905 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 NETO1Q8TDF5 533 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 KRT35Q92764 455 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 NSMCE3Q96MG7 304 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 NUDCD1Q96RS6 583 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 CINPQ9BW66 212 aaPredicted RBP9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 TM9SF3Q9HD45 589 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 RXFP3Q9NSD7 469 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 EIF2B4Q9UI10 523 aaKnown RBP9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 DMTF1Q9Y222 760 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 EFR3BQ9Y2G0 817 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 SLCO1B1Q9Y6L6 691 aa9.59□□□□□ -0.87
SDCCAG3-208ENST00000466579 ATXN2Q99700 1313 aaKnown RBP9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 ADAMTS9Q9P2N4 1935 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 hCG_1818297A0A087WSY0 165 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 TBC1D3DA0A087WVF3 549 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 TBC1D3IA0A087WXS9 549 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 TBC1D3EA0A087X179 549 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 TBC1D3KA0A087X1G2 549 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 A0A1W2PR77 199 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 CCDC66A2RUB6 948 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 TBC1D3FA6NER0 549 aaPredicted RBP9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 TBC1D3LB9A6J9 549 aa9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 CDX4O14627 284 aaPredicted RBP9.58□□□□□ -0.88
SDCCAG3-208ENST00000466579 APOL1O14791 398 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms