RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 MBD1Q9UIS9 605 aaPredicted RBP7.47□□□□□ -1.21
RPUSD3-212ENST00000466141 PHTF1Q9UMS5 762 aa7.47□□□□□ -1.21
RPUSD3-212ENST00000466141 FADS3Q9Y5Q0 445 aa7.47□□□□□ -1.21
RPUSD3-212ENST00000466141 FREM2Q5SZK8 3169 aa7.47□□□□□ -1.21
RPUSD3-212ENST00000466141 THADAQ6YHU6 1953 aa7.47□□□□□ -1.21
RPUSD3-212ENST00000466141 KIAA1549LQ6ZVL6 1849 aa7.46□□□□□ -1.21
RPUSD3-212ENST00000466141 A0A0G2JPF8 293 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 A6NHS1 94 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 OR5K4A6NMS3 321 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 HNRNPCL3B7ZW38 293 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 CFAP99D6REC4 459 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 F5H423 210 aaPredicted RBP7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 H0Y626 953 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 GOLGA8SH3BPF8 625 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 PMM2O15305 246 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 HDAC3O15379 428 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 PHACTR2O75167 634 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 SEC24DO94855 1032 aaPredicted RBP7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 KRT1P04264 644 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 PRB1P04280 392 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 HNRNPCL4P0DMR1 293 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 ENGP17813 658 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 LMO2P25791 158 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 PCSK1P29120 753 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 PTGS2P35354 604 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 SOX6P35712 828 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 PTGER3P43115 390 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 MAPK9P45984 424 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 ALDH1A3P47895 512 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 LHX1P48742 406 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 VPS41P49754 854 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 SULT1E1P49888 294 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 MTTPP55157 894 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 STX17P56962 302 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 VBP1P61758 197 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 MYL7Q01449 175 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 INCA1Q0VD86 236 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 SMARCB1Q12824 385 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 PLD1Q13393 1074 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 TRPC3Q13507 836 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 CYLC2Q14093 348 aaPredicted RBP7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 SQLEQ14534 574 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 WDR72Q3MJ13 1102 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 ARHGAP15Q53QZ3 475 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 ZNF667Q5HYK9 610 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 PERM1Q5SV97 790 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 KRT39Q6A163 491 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 SPOPLQ6IQ16 392 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 ANO7Q6IWH7 933 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 FAM171BQ6P995 826 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 FBXO38Q6PIJ6 1188 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 PLEKHM3Q6ZWE6 761 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 LPCAT2Q7L5N7 544 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 SYT13Q7L8C5 426 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 PIP4P1Q86T03 277 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 SLC9B2Q86UD5 537 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 TRIM59Q8IWR1 403 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 THEM5Q8N1Q8 247 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 FRMD1Q8N878 549 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 STKLD1Q8NE28 680 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 TTC16Q8NEE8 873 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 TSTD1Q8NFU3 115 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 OR2I1PQ8NGU4 316 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 CDC26Q8NHZ8 85 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 ADAM32Q8TC27 787 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 SPPL2BQ8TCT7 592 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 DQX1Q8TE96 717 aaKnown RBP7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 RLN3Q8WXF3 142 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 ATL1Q8WXF7 558 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 SEMA4DQ92854 862 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 PSMG2Q969U7 264 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 C11orf24Q96F05 449 aaPredicted RBP7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 TTC25Q96NG3 672 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 P2RY13Q9BPV8 354 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 ZPBPQ9BS86 351 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 PI4K2AQ9BTU6 479 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 B3GNT4Q9C0J1 378 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 YIPF3Q9GZM5 350 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 SLC32A1Q9H598 525 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 ABCB6Q9NP58 842 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 DMAP1Q9NPF5 467 aaPredicted RBP7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 ST7Q9NRC1 585 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 TMEM74BQ9NUR3 256 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 THG1LQ9NWX6 298 aaKnown RBP7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 ABI2Q9NYB9 513 aaPredicted RBP7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 NXF1Q9UBU9 619 aaKnown RBP7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 HMGXB4Q9UGU5 601 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 ARMCX3Q9UH62 379 aaPredicted RBP7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 EBF1Q9UH73 591 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 RWDD2AQ9UIY3 292 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 CDH9Q9ULB4 789 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 PCDHGC3Q9UN70 934 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 COQ4Q9Y3A0 265 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 CELSR3Q9NYQ7 3312 aa7.46□□□□□ -1.22
RPUSD3-212ENST00000466141 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.45□□□□□ -1.22
RPUSD3-212ENST00000466141 MACROD2A1Z1Q3 448 aa7.45□□□□□ -1.22
RPUSD3-212ENST00000466141 STX16-NPEPL1H3BU86 382 aa7.45□□□□□ -1.22
RPUSD3-212ENST00000466141 UBXN8O00124 270 aa7.45□□□□□ -1.22
RPUSD3-212ENST00000466141 PSMD9O00233 223 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms