RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 ADPRHP54922 357 aa20.56■□□□□ 0.88
PTCD3-206ENST00000465560 CCDC15Q0P6D6 951 aa20.56■□□□□ 0.88
PTCD3-206ENST00000465560 ZNF211Q13398 564 aaPredicted RBP20.56■□□□□ 0.88
PTCD3-206ENST00000465560 ZNF805Q5CZA5 627 aa20.56■□□□□ 0.88
PTCD3-206ENST00000465560 PIP5KL1Q5T9C9 394 aa20.56■□□□□ 0.88
PTCD3-206ENST00000465560 GDPD4Q6W3E5 623 aa20.56■□□□□ 0.88
PTCD3-206ENST00000465560 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.56■□□□□ 0.88
PTCD3-206ENST00000465560 ERN2Q76MJ5 926 aaKnown RBP20.56■□□□□ 0.88
PTCD3-206ENST00000465560 ASCL5Q7RTU5 278 aa20.56■□□□□ 0.88
PTCD3-206ENST00000465560 SRLQ86TD4 932 aa20.56■□□□□ 0.88
PTCD3-206ENST00000465560 FAM122AQ96E09 287 aa20.56■□□□□ 0.88
PTCD3-206ENST00000465560 TUBGCP5Q96RT8 1024 aa20.56■□□□□ 0.88
PTCD3-206ENST00000465560 AMACRQ9UHK6 382 aa20.56■□□□□ 0.88
PTCD3-206ENST00000465560 GMEB2Q9UKD1 530 aa20.56■□□□□ 0.88
PTCD3-206ENST00000465560 DOCK9Q9BZ29 2069 aa20.56■□□□□ 0.88
PTCD3-206ENST00000465560 PLRG1O43660 514 aaKnown RBP20.55■□□□□ 0.88
PTCD3-206ENST00000465560 TJP3O95049 919 aa20.55■□□□□ 0.88
PTCD3-206ENST00000465560 RETP07949 1114 aa20.55■□□□□ 0.88
PTCD3-206ENST00000465560 CCNB1P14635 433 aa20.55■□□□□ 0.88
PTCD3-206ENST00000465560 PTGER3P43115 390 aa20.55■□□□□ 0.88
PTCD3-206ENST00000465560 DHPSP49366 369 aaPredicted RBP20.55■□□□□ 0.88
PTCD3-206ENST00000465560 NEK3P51956 506 aa20.55■□□□□ 0.88
PTCD3-206ENST00000465560 AP1S1P61966 158 aa20.55■□□□□ 0.88
PTCD3-206ENST00000465560 AP1B1Q10567 949 aa20.55■□□□□ 0.88
PTCD3-206ENST00000465560 RPS6KA1Q15418 735 aa20.55■□□□□ 0.88
PTCD3-206ENST00000465560 SLC41A1Q8IVJ1 513 aa20.55■□□□□ 0.88
PTCD3-206ENST00000465560 DEFB119Q8N690 84 aa20.55■□□□□ 0.88
PTCD3-206ENST00000465560 OR14C36Q8NHC7 312 aa20.55■□□□□ 0.88
PTCD3-206ENST00000465560 FOXJ1Q92949 421 aa20.55■□□□□ 0.88
PTCD3-206ENST00000465560 HAUS1Q96CS2 278 aa20.55■□□□□ 0.88
PTCD3-206ENST00000465560 KLHL32Q96NJ5 620 aa20.55■□□□□ 0.88
PTCD3-206ENST00000465560 NUDCD1Q96RS6 583 aa20.55■□□□□ 0.88
PTCD3-206ENST00000465560 KDM4CQ9H3R0 1056 aa20.55■□□□□ 0.88
PTCD3-206ENST00000465560 HAUS2Q9NVX0 235 aa20.55■□□□□ 0.88
PTCD3-206ENST00000465560 RBM22Q9NW64 420 aaKnown RBP eCLIP20.55■□□□□ 0.88
PTCD3-206ENST00000465560 ZFHX2Q9C0A1 2572 aaPredicted RBP20.54■□□□□ 0.88
PTCD3-206ENST00000465560 LRRC72A6NJI9 287 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 PIGNO95427 931 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 SCNN1BP51168 640 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 MAXP61244 160 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 IFI35P80217 286 aaPredicted RBP20.54■□□□□ 0.88
PTCD3-206ENST00000465560 PRKD1Q15139 912 aaPredicted RBP20.54■□□□□ 0.88
PTCD3-206ENST00000465560 RALGPS1Q5JS13 557 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 CCDC181Q5TID7 509 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 LYSMD4Q5XG99 296 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 ALG1LQ6GMV1 187 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 PARS2Q7L3T8 475 aaKnown RBP20.54■□□□□ 0.88
PTCD3-206ENST00000465560 ARMCX6Q7L4S7 300 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 OR2T34Q8NGX1 318 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 TFB1MQ8WVM0 346 aaKnown RBP20.54■□□□□ 0.88
PTCD3-206ENST00000465560 HSPA12BQ96MM6 686 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 ZNF641Q96N77 438 aaPredicted RBP20.54■□□□□ 0.88
PTCD3-206ENST00000465560 POLR1EQ9GZS1 481 aaKnown RBP20.54■□□□□ 0.88
PTCD3-206ENST00000465560 C6orf106Q9H6K1 298 aaPredicted RBP20.54■□□□□ 0.88
PTCD3-206ENST00000465560 ATP13A3Q9H7F0 1226 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 NT5MQ9NPB1 228 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 TRMT1Q9NXH9 659 aaKnown RBP20.54■□□□□ 0.88
PTCD3-206ENST00000465560 NCDNQ9UBB6 729 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 DKK3Q9UBP4 350 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 PYCARDQ9ULZ3 195 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 PCDHGA5Q9Y5G8 931 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 FAM186AA6NE01 2351 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 RIF1Q5UIP0 2472 aaKnown RBP20.54■□□□□ 0.88
PTCD3-206ENST00000465560 TRPM6Q9BX84 2022 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 PLXNA2O75051 1894 aa20.54■□□□□ 0.88
PTCD3-206ENST00000465560 C16orf96A6NNT2 1141 aa20.53■□□□□ 0.88
PTCD3-206ENST00000465560 METTL12A8MUP2 240 aa20.53■□□□□ 0.88
PTCD3-206ENST00000465560 C10orf142B7Z368 130 aa20.53■□□□□ 0.88
PTCD3-206ENST00000465560 KCNK1O00180 336 aa20.53■□□□□ 0.88
PTCD3-206ENST00000465560 GJB3O75712 270 aa20.53■□□□□ 0.88
PTCD3-206ENST00000465560 ADRB3P13945 408 aa20.53■□□□□ 0.88
PTCD3-206ENST00000465560 SERPINA4P29622 427 aa20.53■□□□□ 0.88
PTCD3-206ENST00000465560 TAS2R38P59533 333 aa20.53■□□□□ 0.88
PTCD3-206ENST00000465560 NOMO1Q15155 1222 aa20.53■□□□□ 0.88
PTCD3-206ENST00000465560 SEL1L2Q5TEA6 688 aa20.53■□□□□ 0.88
PTCD3-206ENST00000465560 FBXL19Q6PCT2 694 aa20.53■□□□□ 0.88
PTCD3-206ENST00000465560 NCEH1Q6PIU2 408 aa20.53■□□□□ 0.88
PTCD3-206ENST00000465560 HCAR2Q8TDS4 363 aa20.53■□□□□ 0.88
PTCD3-206ENST00000465560 IL12RB2Q99665 862 aa20.53■□□□□ 0.88
PTCD3-206ENST00000465560 CARD9Q9H257 536 aa20.53■□□□□ 0.88
PTCD3-206ENST00000465560 SUV39H2Q9H5I1 410 aa20.53■□□□□ 0.88
PTCD3-206ENST00000465560 SCUBE2Q9NQ36 999 aa20.53■□□□□ 0.88
PTCD3-206ENST00000465560 EP300Q09472 2414 aaPredicted RBP20.52■□□□□ 0.88
PTCD3-206ENST00000465560 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.52■□□□□ 0.88
PTCD3-206ENST00000465560 TSPAN11A1L157 253 aa20.52■□□□□ 0.88
PTCD3-206ENST00000465560 BCLAF3A2AJT9 711 aaKnown RBP20.52■□□□□ 0.88
PTCD3-206ENST00000465560 FAM47DPA6NHR8 397 aa20.52■□□□□ 0.88
PTCD3-206ENST00000465560 MEI4A8MW99 385 aa20.52■□□□□ 0.88
PTCD3-206ENST00000465560 HACD1B0YJ81 288 aa20.52■□□□□ 0.88
PTCD3-206ENST00000465560 GFRA3O60609 400 aa20.52■□□□□ 0.88
PTCD3-206ENST00000465560 NEBLO76041 1014 aa20.52■□□□□ 0.88
PTCD3-206ENST00000465560 HLA-DQB2P05538 268 aa20.52■□□□□ 0.88
PTCD3-206ENST00000465560 OTUD4Q01804 1114 aaKnown RBP20.52■□□□□ 0.88
PTCD3-206ENST00000465560 CREB5Q02930 508 aa20.52■□□□□ 0.88
PTCD3-206ENST00000465560 BCL2L1Q07817 233 aa20.52■□□□□ 0.88
PTCD3-206ENST00000465560 ZBTB17Q13105 803 aa20.52■□□□□ 0.88
PTCD3-206ENST00000465560 KLF1Q13351 362 aaPredicted RBP20.52■□□□□ 0.88
PTCD3-206ENST00000465560 XRCC4Q13426 336 aa20.52■□□□□ 0.88
PTCD3-206ENST00000465560 KIAA0895LQ68EN5 471 aa20.52■□□□□ 0.88
PTCD3-206ENST00000465560 CYP2U1Q7Z449 544 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms