RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 TUBGCP5Q96RT8 1024 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 HERPUD2Q9BSE4 406 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 ARRDC1-AS1Q9H2J1 176 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 LZTFL1Q9NQ48 299 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 PILRBQ9UKJ0 227 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 PACSIN2Q9UNF0 486 aaPredicted RBP20.59■□□□□ 0.89
SKA3-205ENST00000465471 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.59■□□□□ 0.89
SKA3-205ENST00000465471 HEY1Q9Y5J3 304 aa20.59■□□□□ 0.89
SKA3-205ENST00000465471 GON4LQ3T8J9 2241 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 RALGAPA1Q6GYQ0 2036 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 TSPAN11A1L157 253 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 UGT2B4P06133 528 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 PYGMP11217 842 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 PECAM1P16284 738 aaPredicted RBP20.58■□□□□ 0.89
SKA3-205ENST00000465471 ITPKAP23677 461 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 HOXD12P35452 270 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 DPP6P42658 865 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 MMP13P45452 471 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 RAD51Q06609 339 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 ZNF235Q14590 738 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 GRM3Q14832 879 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 PDK1Q15118 436 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 MARC1Q5VT66 337 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 DCAF12L1Q5VU92 463 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 ALG1LQ6GMV1 187 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 NCEH1Q6PIU2 408 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 GDPD4Q6W3E5 623 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 SRLQ86TD4 932 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 ALYREFQ86V81 257 aaKnown RBP20.58■□□□□ 0.89
SKA3-205ENST00000465471 DCLK2Q8N568 766 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 OR14C36Q8NHC7 312 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 NSMCE1Q8WV22 266 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 NSMCE3Q96MG7 304 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 LGMNQ99538 433 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 PARD6AQ9NPB6 346 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 DYRK4Q9NR20 520 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 DKK3Q9UBP4 350 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 AMACRQ9UHK6 382 aa20.58■□□□□ 0.89
SKA3-205ENST00000465471 LRRC72A6NJI9 287 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 GJB3O75712 270 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 IGHV4-34P06331 123 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 ADRB3P13945 408 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 HOXD11P31277 338 aaPredicted RBP20.57■□□□□ 0.88
SKA3-205ENST00000465471 MAPK8P45983 427 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 NEK3P51956 506 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 AP1S1P61966 158 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 CREB5Q02930 508 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 CCDC15Q0P6D6 951 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 LLGL1Q15334 1064 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 KAZNQ674X7 775 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 KIAA0895LQ68EN5 471 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 SYT12Q8IV01 421 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 CCDC13Q8IYE1 715 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 BBS5Q8N3I7 341 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 UBL4BQ8N7F7 174 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 HCAR2Q8TDS4 363 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 LRRN4Q8WUT4 740 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 KLHL32Q96NJ5 620 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 NUDCD1Q96RS6 583 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 ORAI3Q9BRQ5 295 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 OSBPL8Q9BZF1 889 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 BRD8Q9H0E9 1235 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 TMEM74BQ9NUR3 256 aa20.57■□□□□ 0.88
SKA3-205ENST00000465471 C16orf96A6NNT2 1141 aa20.56■□□□□ 0.88
SKA3-205ENST00000465471 APOC4-APOC2K7ER74 178 aa20.56■□□□□ 0.88
SKA3-205ENST00000465471 PPP1R12AO14974 1030 aaPredicted RBP20.56■□□□□ 0.88
SKA3-205ENST00000465471 AP1G1O43747 822 aa20.56■□□□□ 0.88
SKA3-205ENST00000465471 PIGNO95427 931 aa20.56■□□□□ 0.88
SKA3-205ENST00000465471 APOC2P02655 101 aa20.56■□□□□ 0.88
SKA3-205ENST00000465471 PTMAP06454 111 aaKnown RBP20.56■□□□□ 0.88
SKA3-205ENST00000465471 CCNB1P14635 433 aa20.56■□□□□ 0.88
SKA3-205ENST00000465471 CCR5P51681 352 aa20.56■□□□□ 0.88
SKA3-205ENST00000465471 IFI35P80217 286 aaPredicted RBP20.56■□□□□ 0.88
SKA3-205ENST00000465471 PRKD1Q15139 912 aaPredicted RBP20.56■□□□□ 0.88
SKA3-205ENST00000465471 RALGPS1Q5JS13 557 aa20.56■□□□□ 0.88
SKA3-205ENST00000465471 WDR45BQ5MNZ6 344 aa20.56■□□□□ 0.88
SKA3-205ENST00000465471 SYCP2LQ5T4T6 812 aa20.56■□□□□ 0.88
SKA3-205ENST00000465471 BZW1Q7L1Q6 419 aaKnown RBP20.56■□□□□ 0.88
SKA3-205ENST00000465471 C1orf216Q8TAB5 229 aa20.56■□□□□ 0.88
SKA3-205ENST00000465471 SPOCK2Q92563 424 aa20.56■□□□□ 0.88
SKA3-205ENST00000465471 BIRC7Q96CA5 298 aa20.56■□□□□ 0.88
SKA3-205ENST00000465471 ZNF641Q96N77 438 aaPredicted RBP20.56■□□□□ 0.88
SKA3-205ENST00000465471 IL12RB2Q99665 862 aa20.56■□□□□ 0.88
SKA3-205ENST00000465471 PREBQ9HCU5 417 aa20.56■□□□□ 0.88
SKA3-205ENST00000465471 SAE1Q9UBE0 346 aaPredicted RBP20.56■□□□□ 0.88
SKA3-205ENST00000465471 TPX2Q9ULW0 747 aaKnown RBP20.56■□□□□ 0.88
SKA3-205ENST00000465471 ATXN2Q99700 1313 aaKnown RBP20.55■□□□□ 0.88
SKA3-205ENST00000465471 MEI4A8MW99 385 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 SPINT1O43278 529 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 LATO43561 262 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 ZNF806P0C7X5 589 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 ABL2P42684 1182 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 PPP2CBP62714 309 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 PPP2CAP67775 309 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 SPEM2Q0P670 501 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 CSRP2Q16527 193 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 MEI1Q5TIA1 1274 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 AADACL2Q6P093 401 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 TRIM69Q86WT6 500 aa20.55■□□□□ 0.88
SKA3-205ENST00000465471 CCNYQ8ND76 341 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms