RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 HMGXB4Q9UGU5 601 aa9.62□□□□□ -0.87
APP-213ENST00000464867 SARDHQ9UL12 918 aa9.62□□□□□ -0.87
APP-213ENST00000464867 PPM1HQ9ULR3 514 aa9.62□□□□□ -0.87
APP-213ENST00000464867 ABCA2Q9BZC7 2435 aa9.62□□□□□ -0.87
APP-213ENST00000464867 A0A1B0GTL3 188 aa9.61□□□□□ -0.87
APP-213ENST00000464867 GOLGA6L7A0A1B0GV03 622 aa9.61□□□□□ -0.87
APP-213ENST00000464867 A0A1W2PQM1 296 aa9.61□□□□□ -0.87
APP-213ENST00000464867 POM121BA6NF01 834 aa9.61□□□□□ -0.87
APP-213ENST00000464867 MCF2LO15068 1137 aa9.61□□□□□ -0.87
APP-213ENST00000464867 ACSL4O60488 711 aa9.61□□□□□ -0.87
APP-213ENST00000464867 GCATO75600 419 aa9.61□□□□□ -0.87
APP-213ENST00000464867 ZBED1O96006 694 aa9.61□□□□□ -0.87
APP-213ENST00000464867 FURINP09958 794 aa9.61□□□□□ -0.87
APP-213ENST00000464867 VAV1P15498 845 aa9.61□□□□□ -0.87
APP-213ENST00000464867 ITGB7P26010 798 aa9.61□□□□□ -0.87
APP-213ENST00000464867 LONP1P36776 959 aaKnown RBP9.61□□□□□ -0.87
APP-213ENST00000464867 STK19P49842 368 aaPredicted RBP9.61□□□□□ -0.87
APP-213ENST00000464867 TAS2R38P59533 333 aa9.61□□□□□ -0.87
APP-213ENST00000464867 RPS21P63220 83 aaKnown RBP9.61□□□□□ -0.87
APP-213ENST00000464867 NUCB2P80303 420 aa9.61□□□□□ -0.87
APP-213ENST00000464867 ZFP36L1Q07352 338 aaKnown RBP9.61□□□□□ -0.87
APP-213ENST00000464867 CDC20Q12834 499 aa9.61□□□□□ -0.87
APP-213ENST00000464867 SGCGQ13326 291 aa9.61□□□□□ -0.87
APP-213ENST00000464867 EIF2S3LQ2VIR3 472 aaKnown RBP9.61□□□□□ -0.87
APP-213ENST00000464867 FAXCQ5TGI0 409 aa9.61□□□□□ -0.87
APP-213ENST00000464867 MCTP1Q6DN14 999 aa9.61□□□□□ -0.87
APP-213ENST00000464867 MMS22LQ6ZRQ5 1243 aa9.61□□□□□ -0.87
APP-213ENST00000464867 C8orf86Q6ZUL3 223 aa9.61□□□□□ -0.87
APP-213ENST00000464867 SV2BQ7L1I2 683 aa9.61□□□□□ -0.87
APP-213ENST00000464867 BTLAQ7Z6A9 289 aa9.61□□□□□ -0.87
APP-213ENST00000464867 CCNJLQ8IV13 435 aa9.61□□□□□ -0.87
APP-213ENST00000464867 CCDC13Q8IYE1 715 aa9.61□□□□□ -0.87
APP-213ENST00000464867 XXYLT1Q8NBI6 393 aa9.61□□□□□ -0.87
APP-213ENST00000464867 CCDC112Q8NEF3 446 aa9.61□□□□□ -0.87
APP-213ENST00000464867 TBATAQ96M53 351 aa9.61□□□□□ -0.87
APP-213ENST00000464867 TAAR9Q96RI9 348 aa9.61□□□□□ -0.87
APP-213ENST00000464867 PPP1R9BQ96SB3 815 aa9.61□□□□□ -0.87
APP-213ENST00000464867 SLC17A9Q9BYT1 436 aa9.61□□□□□ -0.87
APP-213ENST00000464867 SLC29A3Q9BZD2 475 aa9.61□□□□□ -0.87
APP-213ENST00000464867 UBXN6Q9BZV1 441 aa9.61□□□□□ -0.87
APP-213ENST00000464867 GPR27Q9NS67 375 aa9.61□□□□□ -0.87
APP-213ENST00000464867 PANK4Q9NVE7 773 aa9.61□□□□□ -0.87
APP-213ENST00000464867 SIRPGQ9P1W8 387 aa9.61□□□□□ -0.87
APP-213ENST00000464867 CCDC39Q9UFE4 941 aa9.61□□□□□ -0.87
APP-213ENST00000464867 KPNA3O00505 521 aaPredicted RBP9.6□□□□□ -0.87
APP-213ENST00000464867 EIF3DO15371 548 aaKnown RBP eCLIP9.6□□□□□ -0.87
APP-213ENST00000464867 LUC7L3O95232 432 aaKnown RBP9.6□□□□□ -0.87
APP-213ENST00000464867 PAK4O96013 591 aaPredicted RBP9.6□□□□□ -0.87
APP-213ENST00000464867 ALBP02768 609 aa9.6□□□□□ -0.87
APP-213ENST00000464867 ALPIP09923 528 aa9.6□□□□□ -0.87
APP-213ENST00000464867 UGT1A3P35503 534 aa9.6□□□□□ -0.87
APP-213ENST00000464867 CYP2J2P51589 502 aa9.6□□□□□ -0.87
APP-213ENST00000464867 TKTL1P51854 596 aa9.6□□□□□ -0.87
APP-213ENST00000464867 ANAPC15P60006 121 aa9.6□□□□□ -0.87
APP-213ENST00000464867 RPS24P62847 133 aaKnown RBP9.6□□□□□ -0.87
APP-213ENST00000464867 SLC12A1Q13621 1099 aa9.6□□□□□ -0.87
APP-213ENST00000464867 ELOCQ15369 112 aa9.6□□□□□ -0.87
APP-213ENST00000464867 FSCBQ5H9T9 825 aa9.6□□□□□ -0.87
APP-213ENST00000464867 PIP5KL1Q5T9C9 394 aa9.6□□□□□ -0.87
APP-213ENST00000464867 LVRNQ6Q4G3 990 aa9.6□□□□□ -0.87
APP-213ENST00000464867 TMPRSS9Q7Z410 1059 aa9.6□□□□□ -0.87
APP-213ENST00000464867 PHACTR4Q8IZ21 702 aa9.6□□□□□ -0.87
APP-213ENST00000464867 APCDD1Q8J025 514 aa9.6□□□□□ -0.87
APP-213ENST00000464867 RBFAQ8N0V3 343 aa9.6□□□□□ -0.87
APP-213ENST00000464867 FSTL5Q8N475 847 aaPredicted RBP9.6□□□□□ -0.87
APP-213ENST00000464867 Q8N9G6 341 aaPredicted RBP9.6□□□□□ -0.87
APP-213ENST00000464867 EDEM1Q92611 657 aa9.6□□□□□ -0.87
APP-213ENST00000464867 TAF4BQ92750 862 aa9.6□□□□□ -0.87
APP-213ENST00000464867 AZIN2Q96A70 460 aa9.6□□□□□ -0.87
APP-213ENST00000464867 FEM1CQ96JP0 617 aa9.6□□□□□ -0.87
APP-213ENST00000464867 CCDC114Q96M63 670 aa9.6□□□□□ -0.87
APP-213ENST00000464867 IPO9Q96P70 1041 aaKnown RBP9.6□□□□□ -0.87
APP-213ENST00000464867 ABCC13Q9NSE7 274 aa9.6□□□□□ -0.87
APP-213ENST00000464867 SLC25A13Q9UJS0 675 aa9.6□□□□□ -0.87
APP-213ENST00000464867 KCTD3Q9Y597 815 aa9.6□□□□□ -0.87
APP-213ENST00000464867 RNF215Q9Y6U7 377 aa9.6□□□□□ -0.87
APP-213ENST00000464867 SPG11Q96JI7 2443 aa9.59□□□□□ -0.87
APP-213ENST00000464867 M0R082 166 aa9.59□□□□□ -0.87
APP-213ENST00000464867 MSI1O43347 362 aaKnown RBP9.59□□□□□ -0.87
APP-213ENST00000464867 RPN1P04843 607 aaKnown RBP9.59□□□□□ -0.87
APP-213ENST00000464867 CTSEP14091 401 aa9.59□□□□□ -0.87
APP-213ENST00000464867 TSHRP16473 764 aa9.59□□□□□ -0.87
APP-213ENST00000464867 NR1D1P20393 614 aa9.59□□□□□ -0.87
APP-213ENST00000464867 ADH7P40394 386 aa9.59□□□□□ -0.87
APP-213ENST00000464867 NOP2P46087 812 aaKnown RBP9.59□□□□□ -0.87
APP-213ENST00000464867 BLKP51451 505 aa9.59□□□□□ -0.87
APP-213ENST00000464867 EIF2B5Q13144 721 aaKnown RBP9.59□□□□□ -0.87
APP-213ENST00000464867 ZXDCQ2QGD7 858 aaPredicted RBP9.59□□□□□ -0.87
APP-213ENST00000464867 FAM133BQ5BKY9 247 aaKnown RBP9.59□□□□□ -0.87
APP-213ENST00000464867 BSPRYQ5W0U4 402 aa9.59□□□□□ -0.87
APP-213ENST00000464867 SEL1L3Q68CR1 1132 aa9.59□□□□□ -0.87
APP-213ENST00000464867 PM20D1Q6GTS8 502 aa9.59□□□□□ -0.87
APP-213ENST00000464867 KIAA1161Q6NSJ0 714 aa9.59□□□□□ -0.87
APP-213ENST00000464867 PIGZQ86VD9 579 aa9.59□□□□□ -0.87
APP-213ENST00000464867 CCDC65Q8IXS2 484 aa9.59□□□□□ -0.87
APP-213ENST00000464867 CFAP52Q8N1V2 620 aa9.59□□□□□ -0.87
APP-213ENST00000464867 KYQ8NBH2 561 aa9.59□□□□□ -0.87
APP-213ENST00000464867 ZNF417Q8TAU3 575 aa9.59□□□□□ -0.87
APP-213ENST00000464867 FRS2Q8WU20 508 aa9.59□□□□□ -0.87
APP-213ENST00000464867 ERCC4Q92889 916 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms