RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 PCDH19Q8TAB3 1148 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 C1orf216Q8TAB5 229 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 PPP1R16AQ96I34 528 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 GTPBP2Q9BX10 602 aaKnown RBP17.28■□□□□ 0.36
VPS52-215ENST00000464425 HDAC8Q9BY41 377 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 EBF2Q9HAK2 575 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 CAPN10Q9HC96 672 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 KCND1Q9NSA2 647 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 PYCARDQ9ULZ3 195 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 CAPN6Q9Y6Q1 641 aa17.28■□□□□ 0.36
VPS52-215ENST00000464425 LRRD1A4D1F6 860 aa17.27■□□□□ 0.36
VPS52-215ENST00000464425 GOLGA6L9A6NEM1 432 aa17.27■□□□□ 0.36
VPS52-215ENST00000464425 ZNF487B1APH4 448 aa17.27■□□□□ 0.36
VPS52-215ENST00000464425 ITGB7P26010 798 aa17.27■□□□□ 0.36
VPS52-215ENST00000464425 MAT2AP31153 395 aaKnown RBP17.27■□□□□ 0.36
VPS52-215ENST00000464425 SERPINB6P35237 376 aa17.27■□□□□ 0.36
VPS52-215ENST00000464425 RAD51Q06609 339 aa17.27■□□□□ 0.36
VPS52-215ENST00000464425 CCDC15Q0P6D6 951 aa17.27■□□□□ 0.36
VPS52-215ENST00000464425 FBXL19Q6PCT2 694 aa17.27■□□□□ 0.36
VPS52-215ENST00000464425 PEX26Q7Z412 305 aa17.27■□□□□ 0.36
VPS52-215ENST00000464425 TSEN2Q8NCE0 465 aaKnown RBP17.27■□□□□ 0.36
VPS52-215ENST00000464425 TRIM58Q8NG06 486 aa17.27■□□□□ 0.36
VPS52-215ENST00000464425 VOPP1Q96AW1 172 aa17.27■□□□□ 0.36
VPS52-215ENST00000464425 LRIG1Q96JA1 1093 aa17.27■□□□□ 0.36
VPS52-215ENST00000464425 KLHL32Q96NJ5 620 aa17.27■□□□□ 0.36
VPS52-215ENST00000464425 ORAI3Q9BRQ5 295 aa17.27■□□□□ 0.36
VPS52-215ENST00000464425 ZNF670Q9BS34 389 aa17.27■□□□□ 0.36
VPS52-215ENST00000464425 CINPQ9BW66 212 aaPredicted RBP17.27■□□□□ 0.36
VPS52-215ENST00000464425 KDM4CQ9H3R0 1056 aa17.27■□□□□ 0.36
VPS52-215ENST00000464425 AMFRQ9UKV5 643 aa17.27■□□□□ 0.36
VPS52-215ENST00000464425 PCDHA3Q9Y5H8 950 aa17.27■□□□□ 0.36
VPS52-215ENST00000464425 A0A1W2PPC4 97 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 CCDC66A2RUB6 948 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 C16orf96A6NNT2 1141 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 MIF4GDA9UHW6 222 aaKnown RBP17.26■□□□□ 0.35
VPS52-215ENST00000464425 ARHGAP33O14559 1287 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 CDX4O14627 284 aaPredicted RBP17.26■□□□□ 0.35
VPS52-215ENST00000464425 PCDH8O95206 1070 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 MAP3K6O95382 1288 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 CTNNA2P26232 953 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 CTNNA1P35221 906 aaKnown RBP17.26■□□□□ 0.35
VPS52-215ENST00000464425 RGRP47804 291 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 CSNK1EP49674 416 aaKnown RBP17.26■□□□□ 0.35
VPS52-215ENST00000464425 CCR5P51681 352 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 NEK3P51956 506 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 ATXN3P54252 364 aaPredicted RBP17.26■□□□□ 0.35
VPS52-215ENST00000464425 SLC10A7Q0GE19 358 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 ZNF805Q5CZA5 627 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 NCBP2-AS2Q69YL0 99 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 LAYNQ6UX15 382 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 GDPD4Q6W3E5 623 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 PARS2Q7L3T8 475 aaKnown RBP17.26■□□□□ 0.35
VPS52-215ENST00000464425 KATNAL2Q8IYT4 538 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 ATPAF2Q8N5M1 289 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 PQLC3Q8N755 202 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 OR2I1PQ8NGU4 316 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 RNF25Q96BH1 459 aaPredicted RBP17.26■□□□□ 0.35
VPS52-215ENST00000464425 ALS2CR12Q96Q35 445 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 TM9SF3Q9HD45 589 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 TMEM9BQ9NQ34 198 aa17.26■□□□□ 0.35
VPS52-215ENST00000464425 C10orf142B7Z368 130 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 SLC30A4O14863 429 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 MFSD11O43934 449 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 MAFKO60675 156 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 RNGTTO60942 597 aaKnown RBP17.25■□□□□ 0.35
VPS52-215ENST00000464425 PIGNO95427 931 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 KRT1P04264 644 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 SYPP08247 313 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 ADRB3P13945 408 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 SDHBP21912 280 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 PEX5P50542 639 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 AFF3P51826 1226 aaKnown RBP17.25■□□□□ 0.35
VPS52-215ENST00000464425 LIMK1P53667 647 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 RFTN1Q14699 578 aaPredicted RBP17.25■□□□□ 0.35
VPS52-215ENST00000464425 LBRQ14739 615 aaKnown RBP17.25■□□□□ 0.35
VPS52-215ENST00000464425 PAFAH1B3Q15102 231 aaKnown RBP17.25■□□□□ 0.35
VPS52-215ENST00000464425 UAP1L1Q3KQV9 507 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 ODF2Q5BJF6 829 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 PRPF39Q86UA1 669 aaKnown RBP17.25■□□□□ 0.35
VPS52-215ENST00000464425 RCOR2Q8IZ40 523 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 KLK6Q92876 244 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 FAF2Q96CS3 445 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 HES6Q96HZ4 224 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 SLC6A18Q96N87 628 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 RNF157Q96PX1 679 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 OSBPL1AQ9BXW6 950 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 PREBQ9HCU5 417 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 TRMT1Q9NXH9 659 aaKnown RBP17.25■□□□□ 0.35
VPS52-215ENST00000464425 DLL3Q9NYJ7 618 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 KNL1Q8NG31 2342 aa17.25■□□□□ 0.35
VPS52-215ENST00000464425 A0A1B0GVT2 93 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 A0A1W2PQU0 124 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 TTC24A2A3L6 582 aaPredicted RBP17.24■□□□□ 0.35
VPS52-215ENST00000464425 DCDC2BA2VCK2 349 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 C3orf70A6NLC5 250 aaPredicted RBP17.24■□□□□ 0.35
VPS52-215ENST00000464425 WNT9AO14904 365 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 MUSKO15146 869 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 GJB3O75712 270 aa17.24■□□□□ 0.35
VPS52-215ENST00000464425 ZRANB2O95218 330 aaKnown RBP eCLIP17.24■□□□□ 0.35
VPS52-215ENST00000464425 PEX11BO96011 259 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms