RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 SATB1Q01826 763 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 DMWDQ09019 674 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 TAF10Q12962 218 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 RIN1Q13671 783 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 RUNX3Q13761 415 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 MORC3Q14149 939 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 MTF1Q14872 753 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 PON2Q15165 354 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 MAPRE1Q15691 268 aaKnown RBP5.62□□□□□ -1.51
CD46-211ENST00000464082 SGSM1Q2NKQ1 1148 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 TMEM196Q5HYL7 178 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 SNX30Q5VWJ9 437 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 ISM2Q6H9L7 571 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 FSTL4Q6MZW2 842 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 CLEC20AQ6ZU45 233 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 CXXC5Q7LFL8 322 aaKnown RBP5.62□□□□□ -1.51
CD46-211ENST00000464082 UNC93AQ86WB7 457 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 RALGPS2Q86X27 583 aaPredicted RBP5.62□□□□□ -1.51
CD46-211ENST00000464082 SUMF1Q8NBK3 374 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 SLC4A11Q8NBS3 891 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 LMO3Q8TAP4 145 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 SLC2A14Q8TDB8 520 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 OSCP1Q8WVF1 389 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 MRPS31Q92665 395 aaKnown RBP5.62□□□□□ -1.51
CD46-211ENST00000464082 TAF4BQ92750 862 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 SLC35C1Q96A29 364 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 MSANTD3Q96H12 275 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 NELL2Q99435 816 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 MLST8Q9BVC4 326 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 LINC00597Q9H2U6 94 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 SNX25Q9H3E2 840 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 C8orf33Q9H7E9 229 aaPredicted RBP5.62□□□□□ -1.51
CD46-211ENST00000464082 KIF9Q9HAQ2 790 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 LMAN1LQ9HAT1 526 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 FAM49BQ9NUQ9 324 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 RIC8BQ9NVN3 520 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 OSER1Q9NX31 292 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 FBXO10Q9UK96 956 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 FBXO4Q9UKT5 387 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 FRMD4BQ9Y2L6 1034 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 WNT6Q9Y6F9 365 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 TMEM131Q92545 1883 aa5.62□□□□□ -1.51
CD46-211ENST00000464082 TRAV19A0A0A6YYK7 116 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 LEFTY2O00292 366 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 TRDMT1O14717 391 aaKnown RBP5.61□□□□□ -1.51
CD46-211ENST00000464082 SCAMP3O14828 347 aaKnown RBP5.61□□□□□ -1.51
CD46-211ENST00000464082 SMAD7O15105 426 aaKnown RBP5.61□□□□□ -1.51
CD46-211ENST00000464082 SLC16A3O15427 465 aaKnown RBP5.61□□□□□ -1.51
CD46-211ENST00000464082 COCHO43405 550 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 KIF20AO95235 890 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 PAPSS2O95340 614 aaPredicted RBP5.61□□□□□ -1.51
CD46-211ENST00000464082 EGFP01133 1207 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 CYP17A1P05093 508 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 HDCP19113 662 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 YWHAQP27348 245 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 MC4RP32245 332 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 GTF2H1P32780 548 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 AVPR1AP37288 418 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 OPRD1P41143 372 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 MEOX1P50221 254 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 MXI1P50539 228 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 RAD23BP54727 409 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 CD83Q01151 205 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 STILQ15468 1287 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 ITPRIPL2Q3MIP1 535 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 ZNF528Q3MIS6 628 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 KRT39Q6A163 491 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 FOXR2Q6PJQ5 311 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 SFTPA1Q8IWL2 248 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 YAF2Q8IY57 180 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 NUP93Q8N1F7 819 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 CSGALNACT1Q8TDX6 532 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 KAT5Q92993 513 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 SMARCE1Q969G3 411 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 CCDC47Q96A33 483 aaKnown RBP5.61□□□□□ -1.51
CD46-211ENST00000464082 SMARCD1Q96GM5 515 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 SEC16BQ96JE7 1060 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 GCNAQ96QF7 691 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 HNRNPABQ99729 332 aaKnown RBP5.61□□□□□ -1.51
CD46-211ENST00000464082 ZSWIM1Q9BR11 485 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 CCSER2Q9H7U1 834 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 ECT2Q9H8V3 914 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 CYP3A43Q9HB55 503 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 NMUR1Q9HB89 426 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 TRPC7Q9HCX4 862 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 DMAP1Q9NPF5 467 aaPredicted RBP5.61□□□□□ -1.51
CD46-211ENST00000464082 POLR3BQ9NW08 1133 aaPredicted RBP5.61□□□□□ -1.51
CD46-211ENST00000464082 RMND1Q9NWS8 449 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 RAB20Q9NX57 234 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 GALNT8Q9NY28 637 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 PACSIN3Q9UKS6 424 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 CPQQ9Y646 472 aa5.61□□□□□ -1.51
CD46-211ENST00000464082 PCDH15Q96QU1 1955 aa5.6□□□□□ -1.51
CD46-211ENST00000464082 A0A1W2PQU0 124 aa5.6□□□□□ -1.51
CD46-211ENST00000464082 PMS2P1A4D2B8 440 aa5.6□□□□□ -1.51
CD46-211ENST00000464082 TULP2O00295 520 aa5.6□□□□□ -1.51
CD46-211ENST00000464082 CETN3O15182 167 aa5.6□□□□□ -1.51
CD46-211ENST00000464082 PMM2O15305 246 aa5.6□□□□□ -1.51
CD46-211ENST00000464082 RTN3O95197 1032 aaPredicted RBP5.6□□□□□ -1.51
CD46-211ENST00000464082 EPB41P11171 864 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms