RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 XYLT1Q86Y38 959 aa17.57■□□□□ 0.4
HMGN1-210ENST00000464078 RBFAQ8N0V3 343 aa17.57■□□□□ 0.4
HMGN1-210ENST00000464078 GLMNQ92990 594 aa17.57■□□□□ 0.4
HMGN1-210ENST00000464078 CENPTQ96BT3 561 aa17.57■□□□□ 0.4
HMGN1-210ENST00000464078 C18orf8Q96DM3 657 aa17.57■□□□□ 0.4
HMGN1-210ENST00000464078 LRRC61Q9BV99 259 aa17.57■□□□□ 0.4
HMGN1-210ENST00000464078 RETREG1Q9H6L5 497 aa17.57■□□□□ 0.4
HMGN1-210ENST00000464078 HECAQ9UBI9 543 aaPredicted RBP17.57■□□□□ 0.4
HMGN1-210ENST00000464078 FCF1Q9Y324 198 aaKnown RBP17.57■□□□□ 0.4
HMGN1-210ENST00000464078 CCDC187A0A096LP49 1063 aa17.56■□□□□ 0.4
HMGN1-210ENST00000464078 FOXN3O00409 490 aaPredicted RBP17.56■□□□□ 0.4
HMGN1-210ENST00000464078 TOR1BO14657 336 aa17.56■□□□□ 0.4
HMGN1-210ENST00000464078 MUSKO15146 869 aa17.56■□□□□ 0.4
HMGN1-210ENST00000464078 SRGAP2O75044 1071 aa17.56■□□□□ 0.4
HMGN1-210ENST00000464078 GCATO75600 419 aa17.56■□□□□ 0.4
HMGN1-210ENST00000464078 GSRP00390 522 aa17.56■□□□□ 0.4
HMGN1-210ENST00000464078 DNA2P51530 1060 aa17.56■□□□□ 0.4
HMGN1-210ENST00000464078 THOP1P52888 689 aa17.56■□□□□ 0.4
HMGN1-210ENST00000464078 YPEL5P62699 121 aa17.56■□□□□ 0.4
HMGN1-210ENST00000464078 NRG1Q02297 640 aaPredicted RBP17.56■□□□□ 0.4
HMGN1-210ENST00000464078 PRRT3Q5FWE3 981 aa17.56■□□□□ 0.4
HMGN1-210ENST00000464078 MANEALQ5VSG8 457 aa17.56■□□□□ 0.4
HMGN1-210ENST00000464078 IRF2BP1Q8IU81 584 aa17.56■□□□□ 0.4
HMGN1-210ENST00000464078 PHACTR4Q8IZ21 702 aa17.56■□□□□ 0.4
HMGN1-210ENST00000464078 LIN37Q96GY3 246 aaPredicted RBP17.56■□□□□ 0.4
HMGN1-210ENST00000464078 OSBPL1AQ9BXW6 950 aa17.56■□□□□ 0.4
HMGN1-210ENST00000464078 TM6SF2Q9BZW4 377 aa17.56■□□□□ 0.4
HMGN1-210ENST00000464078 GGT7Q9UJ14 662 aa17.56■□□□□ 0.4
HMGN1-210ENST00000464078 DNAJC12Q9UKB3 198 aa17.56■□□□□ 0.4
HMGN1-210ENST00000464078 FLNCQ14315 2725 aa17.55■□□□□ 0.4
HMGN1-210ENST00000464078 PMS2P1A4D2B8 440 aa17.55■□□□□ 0.4
HMGN1-210ENST00000464078 NTN3O00634 580 aaPredicted RBP17.55■□□□□ 0.4
HMGN1-210ENST00000464078 NEMP1O14524 444 aa17.55■□□□□ 0.4
HMGN1-210ENST00000464078 LSM8O95777 96 aaKnown RBP17.55■□□□□ 0.4
HMGN1-210ENST00000464078 PNMA6AP0CW24 399 aaPredicted RBP17.55■□□□□ 0.4
HMGN1-210ENST00000464078 C1QBPQ07021 282 aaKnown RBP17.55■□□□□ 0.4
HMGN1-210ENST00000464078 CLN3Q13286 438 aa17.55■□□□□ 0.4
HMGN1-210ENST00000464078 SPIDRQ14159 915 aa17.55■□□□□ 0.4
HMGN1-210ENST00000464078 DRAP1Q14919 205 aaPredicted RBP17.55■□□□□ 0.4
HMGN1-210ENST00000464078 TRNP1Q6NT89 227 aa17.55■□□□□ 0.4
HMGN1-210ENST00000464078 CRTC1Q6UUV9 634 aa17.55■□□□□ 0.4
HMGN1-210ENST00000464078 MACC1Q6ZN28 852 aa17.55■□□□□ 0.4
HMGN1-210ENST00000464078 CCDC81Q6ZN84 652 aa17.55■□□□□ 0.4
HMGN1-210ENST00000464078 FAM131BQ86XD5 332 aa17.55■□□□□ 0.4
HMGN1-210ENST00000464078 DRC7Q8IY82 874 aa17.55■□□□□ 0.4
HMGN1-210ENST00000464078 OR2AP1Q8NGE2 309 aa17.55■□□□□ 0.4
HMGN1-210ENST00000464078 ARHGEF2Q92974 986 aaKnown RBP17.55■□□□□ 0.4
HMGN1-210ENST00000464078 CCDC3Q9BQI4 270 aa17.55■□□□□ 0.4
HMGN1-210ENST00000464078 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.55■□□□□ 0.4
HMGN1-210ENST00000464078 TCEAL2Q9H3H9 227 aaPredicted RBP17.55■□□□□ 0.4
HMGN1-210ENST00000464078 CLMPQ9H6B4 373 aa17.55■□□□□ 0.4
HMGN1-210ENST00000464078 TMEM59LQ9UK28 342 aa17.55■□□□□ 0.4
HMGN1-210ENST00000464078 ATXN7L1Q9ULK2 861 aaPredicted RBP17.55■□□□□ 0.4
HMGN1-210ENST00000464078 PNMA8BQ9ULN7 279 aaPredicted RBP17.55■□□□□ 0.4
HMGN1-210ENST00000464078 ITM2BQ9Y287 266 aa17.55■□□□□ 0.4
HMGN1-210ENST00000464078 LRP4O75096 1905 aa17.55■□□□□ 0.4
HMGN1-210ENST00000464078 ANXA6P08133 673 aa17.54■□□□□ 0.4
HMGN1-210ENST00000464078 CYP11B1P15538 503 aa17.54■□□□□ 0.4
HMGN1-210ENST00000464078 IGFALSP35858 605 aa17.54■□□□□ 0.4
HMGN1-210ENST00000464078 MAPKAPK2P49137 400 aa17.54■□□□□ 0.4
HMGN1-210ENST00000464078 EIF3IQ13347 325 aaKnown RBP17.54■□□□□ 0.4
HMGN1-210ENST00000464078 POLD3Q15054 466 aaPredicted RBP17.54■□□□□ 0.4
HMGN1-210ENST00000464078 ARL13BQ3SXY8 428 aa17.54■□□□□ 0.4
HMGN1-210ENST00000464078 NLRP14Q86W24 1093 aa17.54■□□□□ 0.4
HMGN1-210ENST00000464078 SLC13A1Q9BZW2 595 aa17.54■□□□□ 0.4
HMGN1-210ENST00000464078 ACSL6Q9UKU0 697 aa17.54■□□□□ 0.4
HMGN1-210ENST00000464078 PCDHGA7Q9Y5G6 932 aa17.54■□□□□ 0.4
HMGN1-210ENST00000464078 ACTL7AQ9Y615 435 aa17.54■□□□□ 0.4
HMGN1-210ENST00000464078 TNFSF15O95150 251 aa17.53■□□□□ 0.4
HMGN1-210ENST00000464078 UGT2B4P06133 528 aa17.53■□□□□ 0.4
HMGN1-210ENST00000464078 TSHRP16473 764 aa17.53■□□□□ 0.4
HMGN1-210ENST00000464078 GKP32189 559 aa17.53■□□□□ 0.4
HMGN1-210ENST00000464078 ACVRL1P37023 503 aa17.53■□□□□ 0.4
HMGN1-210ENST00000464078 ADKP55263 362 aaKnown RBP17.53■□□□□ 0.4
HMGN1-210ENST00000464078 SNRPD1P62314 119 aaKnown RBP17.53■□□□□ 0.4
HMGN1-210ENST00000464078 KIAA1614Q5VZ46 1190 aa17.53■□□□□ 0.4
HMGN1-210ENST00000464078 DPY19L2P1Q6NXN4 242 aa17.53■□□□□ 0.4
HMGN1-210ENST00000464078 FSTL5Q8N475 847 aaPredicted RBP17.53■□□□□ 0.4
HMGN1-210ENST00000464078 ARL10Q8N8L6 244 aa17.53■□□□□ 0.4
HMGN1-210ENST00000464078 MSANTD4Q8NCY6 345 aa17.53■□□□□ 0.4
HMGN1-210ENST00000464078 OR6K2Q8NGY2 324 aa17.53■□□□□ 0.4
HMGN1-210ENST00000464078 CFAP57Q96MR6 1250 aa17.53■□□□□ 0.4
HMGN1-210ENST00000464078 CCNL2Q96S94 520 aaPredicted RBP17.53■□□□□ 0.4
HMGN1-210ENST00000464078 C1QTNF7Q9BXJ2 289 aa17.53■□□□□ 0.4
HMGN1-210ENST00000464078 CLPBQ9H078 707 aa17.53■□□□□ 0.4
HMGN1-210ENST00000464078 MAGEH1Q9H213 219 aa17.53■□□□□ 0.4
HMGN1-210ENST00000464078 PDCL3Q9H2J4 239 aa17.53■□□□□ 0.4
HMGN1-210ENST00000464078 PADI4Q9UM07 663 aa17.53■□□□□ 0.4
HMGN1-210ENST00000464078 NEU3Q9UQ49 428 aa17.53■□□□□ 0.4
HMGN1-210ENST00000464078 SCN8AQ9UQD0 1980 aa17.52■□□□□ 0.4
HMGN1-210ENST00000464078 KRIT1O00522 736 aa17.52■□□□□ 0.4
HMGN1-210ENST00000464078 PLD2O14939 933 aa17.52■□□□□ 0.4
HMGN1-210ENST00000464078 YY2O15391 372 aa17.52■□□□□ 0.4
HMGN1-210ENST00000464078 POP4O95707 220 aaKnown RBP17.52■□□□□ 0.4
HMGN1-210ENST00000464078 RHOQP17081 205 aa17.52■□□□□ 0.4
HMGN1-210ENST00000464078 BLKP51451 505 aa17.52■□□□□ 0.4
HMGN1-210ENST00000464078 MAN2A1Q16706 1144 aa17.52■□□□□ 0.4
HMGN1-210ENST00000464078 ESRP1Q6NXG1 681 aaKnown RBP17.52■□□□□ 0.4
HMGN1-210ENST00000464078 LVRNQ6Q4G3 990 aa17.52■□□□□ 0.4
HMGN1-210ENST00000464078 VPS36Q86VN1 386 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms