RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 XRCC4Q13426 336 aa19.17■□□□□ 0.66
LMNB1-204ENST00000463908 PIP5KL1Q5T9C9 394 aa19.17■□□□□ 0.66
LMNB1-204ENST00000463908 CCDC181Q5TID7 509 aa19.17■□□□□ 0.66
LMNB1-204ENST00000463908 GDPD4Q6W3E5 623 aa19.17■□□□□ 0.66
LMNB1-204ENST00000463908 CEP68Q76N32 757 aa19.17■□□□□ 0.66
LMNB1-204ENST00000463908 SLC13A5Q86YT5 568 aaPredicted RBP19.17■□□□□ 0.66
LMNB1-204ENST00000463908 CAMK1DQ8IU85 385 aa19.17■□□□□ 0.66
LMNB1-204ENST00000463908 GANCQ8TET4 914 aa19.17■□□□□ 0.66
LMNB1-204ENST00000463908 TFB1MQ8WVM0 346 aaKnown RBP19.17■□□□□ 0.66
LMNB1-204ENST00000463908 SPACA7Q96KW9 195 aa19.17■□□□□ 0.66
LMNB1-204ENST00000463908 KLHL32Q96NJ5 620 aa19.17■□□□□ 0.66
LMNB1-204ENST00000463908 NUDCD1Q96RS6 583 aa19.17■□□□□ 0.66
LMNB1-204ENST00000463908 NOD2Q9HC29 1040 aa19.17■□□□□ 0.66
LMNB1-204ENST00000463908 FZD4Q9ULV1 537 aa19.17■□□□□ 0.66
LMNB1-204ENST00000463908 NCKAP1Q9Y2A7 1128 aa19.17■□□□□ 0.66
LMNB1-204ENST00000463908 R3HDM2Q9Y2K5 976 aaKnown RBP19.17■□□□□ 0.66
LMNB1-204ENST00000463908 ATP8A1Q9Y2Q0 1164 aa19.17■□□□□ 0.66
LMNB1-204ENST00000463908 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 GOLGA6L9A6NEM1 432 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 C10orf142B7Z368 130 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 MAP3K13O43283 966 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 PIGNO95427 931 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 ATP1A1P05023 1023 aaKnown RBP19.16■□□□□ 0.66
LMNB1-204ENST00000463908 HLA-DQB2P05538 268 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 HSPA9P38646 679 aaKnown RBP19.16■□□□□ 0.66
LMNB1-204ENST00000463908 TAS2R38P59533 333 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 NIPAL4Q0D2K0 466 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 WASHC5Q12768 1159 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 LPAL2Q16609 132 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 ZNF805Q5CZA5 627 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 AGBL4Q5VU57 503 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 SLC36A4Q6YBV0 504 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 PRR23BQ6ZRT6 265 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 TMEFF1Q8IYR6 380 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 ARRDC2Q8TBH0 407 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 GPR174Q9BXC1 333 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 OSBPL1AQ9BXW6 950 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 HDAC8Q9BY41 377 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 CEP41Q9BYV8 373 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 BTBD1Q9H0C5 482 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 SUV39H2Q9H5I1 410 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 AMACRQ9UHK6 382 aa19.16■□□□□ 0.66
LMNB1-204ENST00000463908 C16orf96A6NNT2 1141 aa19.15■□□□□ 0.66
LMNB1-204ENST00000463908 HACD1B0YJ81 288 aa19.15■□□□□ 0.66
LMNB1-204ENST00000463908 ITGB7P26010 798 aa19.15■□□□□ 0.66
LMNB1-204ENST00000463908 PTPN3P26045 913 aa19.15■□□□□ 0.66
LMNB1-204ENST00000463908 EIF3EP60228 445 aaKnown RBP19.15■□□□□ 0.66
LMNB1-204ENST00000463908 RPL6Q02878 288 aaKnown RBP19.15■□□□□ 0.66
LMNB1-204ENST00000463908 SFSWAPQ12872 951 aaKnown RBP19.15■□□□□ 0.66
LMNB1-204ENST00000463908 TEX44Q53QW1 395 aa19.15■□□□□ 0.66
LMNB1-204ENST00000463908 SLC45A4Q5BKX6 768 aa19.15■□□□□ 0.66
LMNB1-204ENST00000463908 SEL1L2Q5TEA6 688 aa19.15■□□□□ 0.66
LMNB1-204ENST00000463908 PMS2CLQ68D20 193 aa19.15■□□□□ 0.66
LMNB1-204ENST00000463908 ALG1LQ6GMV1 187 aa19.15■□□□□ 0.66
LMNB1-204ENST00000463908 ERN2Q76MJ5 926 aaKnown RBP19.15■□□□□ 0.66
LMNB1-204ENST00000463908 C11orf74Q86VG3 221 aa19.15■□□□□ 0.66
LMNB1-204ENST00000463908 SLC41A1Q8IVJ1 513 aa19.15■□□□□ 0.66
LMNB1-204ENST00000463908 BBS5Q8N3I7 341 aa19.15■□□□□ 0.66
LMNB1-204ENST00000463908 QKIQ96PU8 341 aaKnown RBP eCLIP19.15■□□□□ 0.66
LMNB1-204ENST00000463908 TUBGCP5Q96RT8 1024 aa19.15■□□□□ 0.66
LMNB1-204ENST00000463908 SEMA3CQ99985 751 aa19.15■□□□□ 0.66
LMNB1-204ENST00000463908 SEMA4AQ9H3S1 761 aa19.15■□□□□ 0.66
LMNB1-204ENST00000463908 C6orf106Q9H6K1 298 aaPredicted RBP19.15■□□□□ 0.66
LMNB1-204ENST00000463908 USP29Q9HBJ7 922 aa19.15■□□□□ 0.66
LMNB1-204ENST00000463908 SGK2Q9HBY8 427 aa19.15■□□□□ 0.66
LMNB1-204ENST00000463908 SEPT10Q9P0V9 454 aa19.15■□□□□ 0.66
LMNB1-204ENST00000463908 SHROOM3Q8TF72 1996 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 H7C0C1 242 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 TRAFD1O14545 582 aaPredicted RBP19.14■□□□□ 0.65
LMNB1-204ENST00000463908 NDUFS2O75306 463 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 RBP3P10745 1247 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 TIMP2P16035 220 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 ITIH2P19823 946 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 RBL1P28749 1068 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 PTGER3P43115 390 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 ATP5OP48047 213 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 ADPRHP54922 357 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 AP1S1P61966 158 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 DSC2Q02487 901 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 ITKQ08881 620 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 SIX1Q15475 284 aaPredicted RBP19.14■□□□□ 0.65
LMNB1-204ENST00000463908 PARS2Q7L3T8 475 aaKnown RBP19.14■□□□□ 0.65
LMNB1-204ENST00000463908 ADAT2Q7Z6V5 191 aaKnown RBP19.14■□□□□ 0.65
LMNB1-204ENST00000463908 ZSWIM9Q86XI8 627 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 OR14C36Q8NHC7 312 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 SLC35B2Q8TB61 432 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 HTR3CQ8WXA8 447 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 TEKT5Q96M29 485 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 ZNF641Q96N77 438 aaPredicted RBP19.14■□□□□ 0.65
LMNB1-204ENST00000463908 WDR24Q96S15 920 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 POLR1EQ9GZS1 481 aaKnown RBP19.14■□□□□ 0.65
LMNB1-204ENST00000463908 SCUBE2Q9NQ36 999 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 DKK3Q9UBP4 350 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 PCDHGC4Q9Y5F7 938 aa19.14■□□□□ 0.65
LMNB1-204ENST00000463908 WDR87Q6ZQQ6 2873 aa19.13■□□□□ 0.65
LMNB1-204ENST00000463908 FANCGO15287 622 aa19.13■□□□□ 0.65
LMNB1-204ENST00000463908 SLC7A4O43246 635 aa19.13■□□□□ 0.65
LMNB1-204ENST00000463908 PLRG1O43660 514 aaKnown RBP19.13■□□□□ 0.65
LMNB1-204ENST00000463908 CEP104O60308 925 aa19.13■□□□□ 0.65
LMNB1-204ENST00000463908 SEMA4FO95754 770 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms