RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 GPR22Q99680 433 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 IL21Q9HBE4 155 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 VPS45Q9NRW7 570 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 MRPL17Q9NRX2 175 aaKnown RBP12.95□□□□□ -0.34
VAPB-203ENST00000463370 H0YHG0 523 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 KIAA0355O15063 1070 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 BIRC5O15392 142 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 DNAJC6O75061 913 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 SNNO75324 88 aaPredicted RBP12.95□□□□□ -0.34
VAPB-203ENST00000463370 FGF18O76093 207 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 F11P03951 625 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 GSTA1P08263 222 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 CNPP09543 421 aaKnown RBP12.95□□□□□ -0.34
VAPB-203ENST00000463370 PIRTP0C851 137 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 KITP10721 976 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 ELF1P32519 619 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 ARSDP51689 593 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 GALNT3Q14435 633 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 ZNF235Q14590 738 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 PTPRCAPQ14761 206 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 VEPH1Q14D04 833 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 ZNF789Q5FWF6 425 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 STXBP5Q5T5C0 1151 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 ADGRF1Q5T601 910 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 ZNF470Q6ECI4 717 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 FBXO46Q6PJ61 603 aaPredicted RBP12.95□□□□□ -0.34
VAPB-203ENST00000463370 MTDHQ86UE4 582 aaKnown RBP12.95□□□□□ -0.34
VAPB-203ENST00000463370 PACS2Q86VP3 889 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 SLC41A1Q8IVJ1 513 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 LRRC37BQ96QE4 947 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 TMEM120AQ9BXJ8 343 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 TRIM55Q9BYV6 548 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 POLR1EQ9GZS1 481 aaKnown RBP12.95□□□□□ -0.34
VAPB-203ENST00000463370 MRM3Q9HC36 420 aaKnown RBP12.95□□□□□ -0.34
VAPB-203ENST00000463370 MYLKQ15746 1914 aa12.95□□□□□ -0.34
VAPB-203ENST00000463370 LOC285095A0A1B0GVY8 99 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 TGM5O43548 720 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 TIMM44O43615 452 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 BUD23O43709 281 aaKnown RBP12.94□□□□□ -0.34
VAPB-203ENST00000463370 GREM1O60565 184 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 HAUS5O94927 633 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 IL1BP01584 269 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 MBL2P11226 248 aaPredicted RBP12.94□□□□□ -0.34
VAPB-203ENST00000463370 SMAD3P84022 425 aaKnown RBP12.94□□□□□ -0.34
VAPB-203ENST00000463370 FSCBQ5H9T9 825 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 RABGAP1LQ5R372 815 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 CXorf57Q6NSI4 855 aaKnown RBP12.94□□□□□ -0.34
VAPB-203ENST00000463370 CEP97Q8IW35 865 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 KIF2BQ8N4N8 673 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 ARL14EPQ8N8R7 260 aaPredicted RBP12.94□□□□□ -0.34
VAPB-203ENST00000463370 PTCD2Q8WV60 388 aaKnown RBP12.94□□□□□ -0.34
VAPB-203ENST00000463370 BHMTQ93088 406 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 MAGEH1Q9H213 219 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 RHOJQ9H4E5 214 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 SLC40A1Q9NP59 571 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 FBXO6Q9NRD1 293 aaPredicted RBP12.94□□□□□ -0.34
VAPB-203ENST00000463370 COPG2Q9UBF2 871 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 OR51F1A6NGY5 319 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 ZBBXA8MT70 800 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 DNAJC8O75937 253 aaPredicted RBP12.94□□□□□ -0.34
VAPB-203ENST00000463370 KCNJ2P63252 427 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 CYP4F8P98187 520 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 CCDC15Q0P6D6 951 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 TSTD2Q5T7W7 516 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 KIAA0930Q6ICG6 404 aaPredicted RBP12.94□□□□□ -0.34
VAPB-203ENST00000463370 LDB1Q86U70 411 aaPredicted RBP12.94□□□□□ -0.34
VAPB-203ENST00000463370 ARID3BQ8IVW6 561 aaPredicted RBP12.94□□□□□ -0.34
VAPB-203ENST00000463370 SPATA6LQ8N4H0 392 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 MOCOSQ96EN8 888 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 C7orf26Q96N11 449 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 SMIM14Q96QK8 99 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 UNKQ9C0B0 810 aaKnown RBP12.94□□□□□ -0.34
VAPB-203ENST00000463370 ZBP1Q9H171 429 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 NOD2Q9HC29 1040 aa12.94□□□□□ -0.34
VAPB-203ENST00000463370 CXXC1Q9P0U4 656 aaPredicted RBP12.94□□□□□ -0.34
VAPB-203ENST00000463370 HEATR9A2RTY3 570 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 LDB2O43679 373 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 CLDN11O75508 207 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 TGDSO95455 350 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 SLC35E2BP0CK96 405 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 MYL2P10916 166 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 TARSP26639 723 aaKnown RBP12.93□□□□□ -0.34
VAPB-203ENST00000463370 EPHB3P54753 998 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 MTA1Q13330 715 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 USP10Q14694 798 aaKnown RBP12.93□□□□□ -0.34
VAPB-203ENST00000463370 INSCQ1MX18 579 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 TAF1BQ53T94 588 aaPredicted RBP12.93□□□□□ -0.34
VAPB-203ENST00000463370 ATG16L1Q676U5 607 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 CNSTQ6PJW8 725 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 LINGO4Q6UY18 593 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 GAREM2Q75VX8 874 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 HS6ST3Q8IZP7 471 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 TMEM199Q8N511 208 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 GBP7Q8N8V2 638 aaPredicted RBP12.93□□□□□ -0.34
VAPB-203ENST00000463370 C2CD4AQ8NCU7 369 aaPredicted RBP12.93□□□□□ -0.34
VAPB-203ENST00000463370 C1QTNF1Q9BXJ1 281 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 ACSS2Q9NR19 701 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 CPSF2Q9P2I0 782 aaKnown RBP12.93□□□□□ -0.34
VAPB-203ENST00000463370 ARL5AQ9Y689 179 aa12.93□□□□□ -0.34
VAPB-203ENST00000463370 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms