RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PSMD3O43242 534 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 NEBLO76041 1014 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 TMEM63AO94886 807 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 POP4O95707 220 aaKnown RBP14.52□□□□□ -0.09
COL6A1-202ENST00000463060 PRLP01236 227 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 CD72P21854 359 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 PRKCHP24723 683 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 SCNN1BP51168 640 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 GEMP55040 296 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 ST8SIA6P61647 398 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 AP1S1P61966 158 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 SNRPD1P62314 119 aaKnown RBP14.52□□□□□ -0.09
COL6A1-202ENST00000463060 BASP1P80723 227 aaKnown RBP14.52□□□□□ -0.09
COL6A1-202ENST00000463060 MRPS21P82921 87 aaKnown RBP14.52□□□□□ -0.09
COL6A1-202ENST00000463060 ITKQ08881 620 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 MPP3Q13368 585 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 CUL1Q13616 776 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 E2F5Q15329 346 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 ACCSLQ4AC99 568 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 FBXO43Q4G163 708 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 FNDC3BQ53EP0 1204 aaKnown RBP14.52□□□□□ -0.09
COL6A1-202ENST00000463060 DENND5AQ6IQ26 1287 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 RANBP10Q6VN20 620 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 ZNF852Q6ZMS4 543 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 DPY19L3Q6ZPD9 716 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 Q6ZVU0 165 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 MCUQ8NE86 351 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 FBXO25Q8TCJ0 367 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 SPOCK2Q92563 424 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 GDAP1L1Q96MZ0 367 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 TRIB3Q96RU7 358 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 PARD6BQ9BYG5 372 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 CPEB1Q9BZB8 566 aaKnown RBP14.52□□□□□ -0.09
COL6A1-202ENST00000463060 FAM129AQ9BZQ8 928 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 ARNT2Q9HBZ2 717 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 CD248Q9HCU0 757 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 ARHGEF3Q9NR81 526 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 UBP1Q9NZI7 540 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 EVLQ9UI08 416 aaPredicted RBP14.52□□□□□ -0.09
COL6A1-202ENST00000463060 ANAPC5Q9UJX4 755 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 SHOC2Q9UQ13 582 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 STON1Q9Y6Q2 735 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 EDDM13A0A1B0GTR0 161 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 TRAFD1O14545 582 aaPredicted RBP14.51□□□□□ -0.09
COL6A1-202ENST00000463060 HTRA2O43464 458 aaPredicted RBP14.51□□□□□ -0.09
COL6A1-202ENST00000463060 FZD6O60353 706 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 IGSF6O95976 241 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 EPOP01588 193 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 APRTP07741 180 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 SERPINF2P08697 491 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 C7P10643 843 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 CHRNB1P11230 501 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 GRIA1P42261 906 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 MAGEA3P43357 314 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 MAPK8P45983 427 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 CCNHP51946 323 aaPredicted RBP14.51□□□□□ -0.09
COL6A1-202ENST00000463060 WNT3AP56704 352 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 VSNL1P62760 191 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 CAV1Q03135 178 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 CALCOCO2Q13137 446 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 CAMK2GQ13555 558 aaPredicted RBP14.51□□□□□ -0.09
COL6A1-202ENST00000463060 PRPSAP1Q14558 356 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 ZNF534Q76KX8 674 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 CAND1Q86VP6 1230 aaKnown RBP14.51□□□□□ -0.09
COL6A1-202ENST00000463060 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.51□□□□□ -0.09
COL6A1-202ENST00000463060 ZNF366Q8N895 744 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 ZNF513Q8N8E2 541 aaPredicted RBP14.51□□□□□ -0.09
COL6A1-202ENST00000463060 IL17RCQ8NAC3 791 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 CHST14Q8NCH0 376 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 FAM129BQ96TA1 746 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 GABRG3Q99928 467 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 ZDHHC4Q9NPG8 344 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 SCUBE2Q9NQ36 999 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 PRSS16Q9NQE7 514 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 HECAQ9UBI9 543 aaPredicted RBP14.51□□□□□ -0.09
COL6A1-202ENST00000463060 SUN2Q9UH99 717 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 CA14Q9ULX7 337 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 TTLL3Q9Y4R7 772 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 PCDHGC4Q9Y5F7 938 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 WASF2Q9Y6W5 498 aa14.51□□□□□ -0.09
COL6A1-202ENST00000463060 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.5□□□□□ -0.09
COL6A1-202ENST00000463060 NDC80O14777 642 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 ADAM23O75077 832 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 SIN3BO75182 1162 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 PMPCBO75439 489 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 TUBBP07437 444 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 MYBL2P10244 700 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 HLA-EP13747 358 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 NTSR1P30989 418 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 GKP32189 559 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 TIE1P35590 1138 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 PLTPP55058 493 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 TRAF2Q12933 501 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 MSLNQ13421 630 aaPredicted RBP14.5□□□□□ -0.09
COL6A1-202ENST00000463060 OLIG2Q13516 323 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 ELF2Q15723 593 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 SERPINA13PQ6UXR4 307 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 OR6K2Q8NGY2 324 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 ECHDC3Q96DC8 303 aa14.5□□□□□ -0.09
COL6A1-202ENST00000463060 SHDQ96IW2 340 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms