RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 CSPG5O95196 566 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 PMLP29590 882 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 ALDH1A3P47895 512 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 TAF10Q12962 218 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 ITGA9Q13797 1035 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 DPYSQ14117 519 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 PDE1CQ14123 709 aaPredicted RBP11.36□□□□□ -0.59
COPS7B-217ENST00000461350 GRM2Q14416 872 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 PCLAFQ15004 111 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 CNGA3Q16281 694 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 USP41Q3LFD5 358 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 ARL13BQ3SXY8 428 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 PSTKQ8IV42 348 aaKnown RBP11.36□□□□□ -0.59
COPS7B-217ENST00000461350 FBXW8Q8N3Y1 598 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 CCNYQ8ND76 341 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 MCUQ8NE86 351 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 TFB1MQ8WVM0 346 aaKnown RBP11.36□□□□□ -0.59
COPS7B-217ENST00000461350 CDKL2Q92772 493 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 FBXO32Q969P5 355 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 DNAJC1Q96KC8 554 aaKnown RBP11.36□□□□□ -0.59
COPS7B-217ENST00000461350 TMEM106CQ9BVX2 250 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 TXNDC16Q9P2K2 825 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 ARHGAP26Q9UNA1 814 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 SCML2Q9UQR0 700 aa11.36□□□□□ -0.59
COPS7B-217ENST00000461350 MYO7AQ13402 2215 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 SHROOM3Q8TF72 1996 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 hCG_2014768A0A024R1R8 64 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 ABHD14A-ACY1A0A1B0GW23 586 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 BCLAF3A2AJT9 711 aaKnown RBP11.35□□□□□ -0.59
COPS7B-217ENST00000461350 ZNF487B1APH4 448 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 H7C4K7 107 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 LRIG2O94898 1065 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 CLPTM1O96005 669 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 GSRP00390 522 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 ALDOAP04075 364 aaKnown RBP11.35□□□□□ -0.59
COPS7B-217ENST00000461350 ATP6V1B1P15313 513 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 ZFXP17010 805 aaPredicted RBP11.35□□□□□ -0.59
COPS7B-217ENST00000461350 GMPRP36959 345 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 FDFT1P37268 417 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 MAGEA11P43364 429 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 SEMA3BQ13214 749 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 ZNF534Q76KX8 674 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 CDKL3Q8IVW4 592 aaPredicted RBP11.35□□□□□ -0.59
COPS7B-217ENST00000461350 SCML4Q8N228 414 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 RTP4Q96DX8 246 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 FAM96AQ9H5X1 160 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 RRN3Q9NYV6 651 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 NDUFA13Q9P0J0 144 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 SEPT10Q9P0V9 454 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 ZBBXA8MT70 800 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 IGLV3-25P01717 112 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 HSPA1AP0DMV8 641 aaKnown RBP11.35□□□□□ -0.59
COPS7B-217ENST00000461350 HSPA1BP0DMV9 641 aaKnown RBP11.35□□□□□ -0.59
COPS7B-217ENST00000461350 RALBP11234 206 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 COX4I1P13073 169 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 ATF6P18850 670 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 CNTFP26441 200 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 YWHAQP27348 245 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 SESN2P58004 480 aaPredicted RBP11.35□□□□□ -0.59
COPS7B-217ENST00000461350 SCAPQ12770 1279 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 EFEMP1Q12805 493 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 PPM1JQ5JR12 505 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 RWDD4Q6NW29 188 aaKnown RBP11.35□□□□□ -0.59
COPS7B-217ENST00000461350 UGT2A3Q6UWM9 527 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 RBM44Q6ZP01 1051 aaKnown RBP11.35□□□□□ -0.59
COPS7B-217ENST00000461350 TMC7Q7Z402 723 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 MON1AQ86VX9 555 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 MIB1Q86YT6 1006 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 NPWQ8N729 165 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 DGCR14Q96DF8 476 aaKnown RBP11.35□□□□□ -0.59
COPS7B-217ENST00000461350 BTBD9Q96Q07 612 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 Q9H521 79 aa11.35□□□□□ -0.59
COPS7B-217ENST00000461350 G3BP2Q9UN86 482 aaKnown RBP11.35□□□□□ -0.59
COPS7B-217ENST00000461350 AIM2O14862 343 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 HMBSP08397 361 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 HAPLN1P10915 354 aaPredicted RBP11.34□□□□□ -0.59
COPS7B-217ENST00000461350 EN2P19622 333 aaPredicted RBP11.34□□□□□ -0.59
COPS7B-217ENST00000461350 GRK2P25098 689 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 TYK2P29597 1187 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 RFC2P35250 354 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 USP4Q13107 963 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 TLR1Q15399 786 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 FSCBQ5H9T9 825 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 TIFABQ6ZNK6 161 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 LCA5Q86VQ0 697 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 SPPL2BQ8TCT7 592 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 ZNF689Q96CS4 500 aaPredicted RBP11.34□□□□□ -0.59
COPS7B-217ENST00000461350 DCUN1D1Q96GG9 259 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 TMEM169Q96HH4 297 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 SORT1Q99523 831 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 CLSTN3Q9BQT9 956 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 SMOC2Q9H3U7 446 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 FBXO44Q9H4M3 255 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 PRDM12Q9H4Q4 367 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 PREBQ9HCU5 417 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 DNAJC28Q9NX36 388 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 RCOR3Q9P2K3 495 aaPredicted RBP11.34□□□□□ -0.59
COPS7B-217ENST00000461350 GREB1Q4ZG55 1949 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 H3BNX3 289 aa11.34□□□□□ -0.59
COPS7B-217ENST00000461350 KIAA0355O15063 1070 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms