RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, human

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-204	ENST00000461044	IZUMO1	Q8IYV9	350 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	ADGRF2	Q8IZF7	708 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	SLC44A3	Q8N4M1	653 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	APPL2	Q8NEU8	664 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	RFWD2	Q8NHY2	731 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	KCNJ9	Q92806	393 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	ARHGEF2	Q92974	986 aa	Known RBP	3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	CAVIN3	Q969G5	261 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	VPS33A	Q96AX1	596 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	PGAP3	Q96FM1	320 aa	Predicted RBP	3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	TRMT61A	Q96FX7	289 aa	Known RBP	3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	PDLIM2	Q96JY6	352 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	KLHL15	Q96M94	604 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	C5orf34	Q96MH7	638 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	BBC3	Q96PG8	261 aa	Predicted RBP	3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	DPCD	Q9BVM2	203 aa	Predicted RBP	3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	AMBRA1	Q9C0C7	1298 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	SLC32A1	Q9H598	525 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	RABEP2	Q9H5N1	569 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	LTB4R2	Q9NPC1	389 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	FBXO28	Q9NVF7	368 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	MTMR4	Q9NYA4	1195 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	EHD2	Q9NZN4	543 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	HCN3	Q9P1Z3	774 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	ZNF70	Q9UC06	446 aa	Predicted RBP	3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	KL	Q9UEF7	1012 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	CCL27	Q9Y4X3	112 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	DUOX2	Q9NRD8	1548 aa		3.39	□□□□□ -1.87
FXR1-204	ENST00000461044	AKAP12	Q02952	1782 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	ADAMTS13	Q76LX8	1427 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	EIF2AK4	Q9P2K8	1649 aa	Known RBP	3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	MBD3L5	A6NJ08	208 aa	Predicted RBP	3.38	□□□□□ -1.87
FXR1-204	ENST00000461044		A8MXE2	369 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	PI4K2B	G5E9Z4	385 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044		H0Y626	953 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	LDLRAD4	O15165	306 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	CA12	O43570	354 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	LIAS	O43766	372 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	NUDT3	O95989	172 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	AFP	P02771	609 aa	Known RBP	3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	MT-ND3	P03897	115 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	TMEM225B	P0DP42	221 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	TNNT1	P13805	278 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	KCNA2	P16389	499 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	ITGAL	P20701	1170 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	THPO	P40225	353 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	MSH2	P43246	934 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	PCP4	P48539	62 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	RARRES1	P49788	294 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	NDUFV1	P49821	464 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	ZNF41	P51814	821 aa	Predicted RBP	3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	RAD23A	P54725	363 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	CDH8	P55286	799 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	RRP1	P56182	461 aa	Known RBP	3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	SIM1	P81133	766 aa	Predicted RBP	3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	TMF1	P82094	1093 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	DEUP1	Q05D60	604 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	TFCP2	Q12800	502 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	DYRK1A	Q13627	763 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	FRG1	Q14331	258 aa	Known RBP	3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	ADIPOQ	Q15848	244 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	TXNRD1	Q16881	649 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	ZNF667	Q5HYK9	610 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	CDC73	Q6P1J9	531 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	NCEH1	Q6PIU2	408 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	SCN4B	Q8IWT1	228 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	CCDC105	Q8IYK2	499 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	POC5	Q8NA72	575 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	TMEM116	Q8NCL8	245 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	PIGO	Q8TEQ8	1089 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	OVCA2	Q8WZ82	227 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	INTS12	Q96CB8	462 aa	Known RBP	3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	TBC1D31	Q96DN5	1066 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	SAAL1	Q96ER3	474 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	PTCD3	Q96EY7	689 aa	Known RBP	3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	ZNF845	Q96IR2	970 aa	Predicted RBP	3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	SRSF8	Q9BRL6	282 aa	Known RBP	3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	AIFM2	Q9BRQ8	373 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	VN1R3	Q9BXE9	311 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	HDHD5	Q9BXW7	423 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	MAK16	Q9BXY0	300 aa	Known RBP	3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	GLIS2	Q9BZE0	524 aa	Predicted RBP	3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	EDEM3	Q9BZQ6	932 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	R3HDML	Q9H3Y0	253 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	SAP30L	Q9HAJ7	183 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	SCPEP1	Q9HB40	452 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	KCTD5	Q9NXV2	234 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	TAB2	Q9NYJ8	693 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	MRPL15	Q9P015	296 aa	Known RBP	3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	SH3BP4	Q9P0V3	963 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	HDAC6	Q9UBN7	1215 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	HSPB7	Q9UBY9	170 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	NKX1-2	Q9UD57	310 aa	Predicted RBP	3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	TES	Q9UGI8	421 aa	Known RBP	3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	STEAP1	Q9UHE8	339 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	ZNHIT2	Q9UHR6	403 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	MKLN1	Q9UL63	735 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	NENF	Q9UMX5	172 aa		3.38	□□□□□ -1.87
FXR1-204	ENST00000461044	PA2G4	Q9UQ80	394 aa	Known RBP	3.38	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms