RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 ATF7IPQ6VMQ6 1270 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 FAM83HQ6ZRV2 1179 aaPredicted RBP3.6□□□□□ -1.83
RFC4-211ENST00000460408 NEK10Q6ZWH5 1172 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 TADA2BQ86TJ2 420 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 SERPINA11Q86U17 422 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.6□□□□□ -1.83
RFC4-211ENST00000460408 FAM185AQ8N0U4 392 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 CADM3Q8N126 398 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 DPP10Q8N608 796 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 LRRC57Q8N9N7 239 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 ZMIZ2Q8NF64 920 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 KCNG4Q8TDN1 519 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 PIGOQ8TEQ8 1089 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 KLHL29Q96CT2 875 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 KIF1BPQ96EK5 621 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 PERPQ96FX8 193 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 CHCHD6Q9BRQ6 235 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 KLHL31Q9H511 634 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 WDR6Q9NNW5 1121 aaKnown RBP3.6□□□□□ -1.83
RFC4-211ENST00000460408 PCDHB16Q9NRJ7 776 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 SEL1LQ9UBV2 794 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 CDH22Q9UJ99 828 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 PCDHGB5Q9Y5G0 923 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 SLC4A4Q9Y6R1 1079 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 PIAS3Q9Y6X2 628 aa3.6□□□□□ -1.83
RFC4-211ENST00000460408 C17orf102A2RUQ5 167 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 HSPB6O14558 160 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 MDM4O15151 490 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 INSIG1O15503 277 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 KIF1CO43896 1103 aaKnown RBP3.59□□□□□ -1.83
RFC4-211ENST00000460408 EPN2O95208 641 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 CLDN7O95471 211 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 IFNA2P01563 188 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 CHMP24386 653 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 PSMA4P25789 261 aaKnown RBP3.59□□□□□ -1.83
RFC4-211ENST00000460408 TKTP29401 623 aaKnown RBP3.59□□□□□ -1.83
RFC4-211ENST00000460408 CPOXP36551 454 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 CASP2P42575 452 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 CXCR3P49682 368 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 YWHAZP63104 245 aaKnown RBP3.59□□□□□ -1.83
RFC4-211ENST00000460408 LAMB3Q13751 1172 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 INPP5JQ15735 1006 aaPredicted RBP3.59□□□□□ -1.83
RFC4-211ENST00000460408 EDRF1Q3B7T1 1238 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 HMBOX1Q6NT76 420 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 B4GALNT4Q76KP1 1039 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 RRM2BQ7LG56 351 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 PXKQ7Z7A4 578 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 PCGF5Q86SE9 256 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 TMC8Q8IU68 726 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 ADSSL1Q8N142 457 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 MCPH1Q8NEM0 835 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 C16orf52Q8NHV5 167 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 CREB3L4Q8TEY5 395 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 NOC3LQ8WTT2 800 aaKnown RBP3.59□□□□□ -1.83
RFC4-211ENST00000460408 ATOH1Q92858 354 aaPredicted RBP3.59□□□□□ -1.83
RFC4-211ENST00000460408 SAAL1Q96ER3 474 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 PIP5K1AQ99755 562 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 WDR77Q9BQA1 342 aaPredicted RBP3.59□□□□□ -1.83
RFC4-211ENST00000460408 B3GNT4Q9C0J1 378 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 RANBP17Q9H2T7 1088 aaKnown RBP3.59□□□□□ -1.83
RFC4-211ENST00000460408 BABAM1Q9NWV8 329 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 NCKIPSDQ9NZQ3 722 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 HEY2Q9UBP5 337 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 COG5Q9UP83 839 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.59□□□□□ -1.83
RFC4-211ENST00000460408 RAP2CQ9Y3L5 183 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 LRP12Q9Y561 859 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 RAI2Q9Y5P3 530 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 PSAT1Q9Y617 370 aa3.59□□□□□ -1.83
RFC4-211ENST00000460408 PI4KAP2A4QPH2 592 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 FGBP02675 491 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 MYZAPP0CAP1 466 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 LAMP2P13473 410 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 PRF1P14222 555 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 PTPN2P17706 415 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 TNFRSF1BP20333 461 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 MAPK4P31152 587 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 DCTDP32321 178 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 BSGP35613 385 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 GPR12P47775 334 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 POLD2P49005 469 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 EIF3BP55884 814 aaKnown RBP3.58□□□□□ -1.84
RFC4-211ENST00000460408 CLDN2P57739 230 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 RPL7AP62424 266 aaKnown RBP3.58□□□□□ -1.84
RFC4-211ENST00000460408 GAD2Q05329 585 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 DCTN2Q13561 401 aaKnown RBP3.58□□□□□ -1.84
RFC4-211ENST00000460408 RNPS1Q15287 305 aaKnown RBP3.58□□□□□ -1.84
RFC4-211ENST00000460408 RBMS2Q15434 407 aaKnown RBP3.58□□□□□ -1.84
RFC4-211ENST00000460408 TAF11Q15544 211 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 HAUS3Q68CZ6 603 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 MZT2BQ6NZ67 158 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 SHC4Q6S5L8 630 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 FAM217AQ8IXS0 508 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 SAMD14Q8IZD0 417 aaPredicted RBP3.58□□□□□ -1.84
RFC4-211ENST00000460408 CNTROBQ8N137 903 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 NGEFQ8N5V2 710 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 HORMAD2Q8N7B1 307 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 PRSS3P2Q8NHM4 247 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 RASSF8Q8NHQ8 419 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 MPLKIPQ8TAP9 179 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms