RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ALG14Q96F25 216 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 CCDC68Q9H2F9 335 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 TCF7L2Q9NQB0 619 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 PIH1D1Q9NWS0 290 aaKnown RBP10.49□□□□□ -0.73
USP39-210ENST00000459775 GRHL1Q9NZI5 618 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 FAM153AQ9UHL3 310 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 ZNF510Q9Y2H8 683 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 NOSIPQ9Y314 301 aaKnown RBP10.49□□□□□ -0.73
USP39-210ENST00000459775 DOCK8Q8NF50 2099 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 MUSKO15146 869 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 GFRA3O60609 400 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 CD160O95971 181 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 PENKP01210 267 aaPredicted RBP10.49□□□□□ -0.73
USP39-210ENST00000459775 CCNB1P14635 433 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 ECHS1P30084 290 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 CD68P34810 354 aaPredicted RBP10.49□□□□□ -0.73
USP39-210ENST00000459775 IFNAR2P48551 515 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 MAPKAPK2P49137 400 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 NDST2P52849 883 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 PLTPP55058 493 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 PTK6Q13882 451 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 IHHQ14623 411 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 GAB4Q2WGN9 574 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 KBTBD12Q3ZCT8 623 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 C6orf118Q5T5N4 469 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 PPP4R4Q6NUP7 873 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 PGBD5Q8N414 524 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 SLCO2A1Q92959 643 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 ERLEC1Q96DZ1 483 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 CHFRQ96EP1 664 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 EXOC2Q96KP1 924 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 RPL10LQ96L21 214 aaKnown RBP10.49□□□□□ -0.73
USP39-210ENST00000459775 TRPV4Q9HBA0 871 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 ATP13A1Q9HD20 1204 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 ZDHHC4Q9NPG8 344 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 GDF3Q9NR23 364 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 KCTD5Q9NXV2 234 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 MUTYHQ9UIF7 546 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 VPS28Q9UK41 221 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 UTP11Q9Y3A2 253 aaKnown RBP10.49□□□□□ -0.73
USP39-210ENST00000459775 OR51B4Q9Y5P0 310 aa10.49□□□□□ -0.73
USP39-210ENST00000459775 NYNRINQ9P2P1 1898 aaKnown RBP10.49□□□□□ -0.73
USP39-210ENST00000459775 HELZP42694 1942 aaKnown RBP10.48□□□□□ -0.73
USP39-210ENST00000459775 ARHGAP42A6NI28 874 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 BHMG1C9JSJ3 638 aaPredicted RBP10.48□□□□□ -0.73
USP39-210ENST00000459775 CYBBP04839 570 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 MX2P20592 715 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 GRIA1P42261 906 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 STK19P49842 368 aaPredicted RBP10.48□□□□□ -0.73
USP39-210ENST00000459775 ARF5P84085 180 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 MRPL28Q13084 256 aaKnown RBP10.48□□□□□ -0.73
USP39-210ENST00000459775 SPARCL1Q14515 664 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 GRAMD1BQ3KR37 738 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 HP1BP3Q5SSJ5 553 aaPredicted RBP10.48□□□□□ -0.73
USP39-210ENST00000459775 TMEM215Q68D42 235 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 ZDHHC24Q6UX98 284 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 ERMP1Q7Z2K6 904 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 PID1Q7Z2X4 250 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 SRLQ86TD4 932 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 MFSD6LQ8IWD5 586 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 GPR161Q8N6U8 529 aaKnown RBP10.48□□□□□ -0.73
USP39-210ENST00000459775 SPATA22Q8NHS9 363 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 SUN5Q8TC36 379 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 GRK7Q8WTQ7 553 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 NSMCE3Q96MG7 304 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 GORASP1Q9BQQ3 440 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 C2orf49Q9BVC5 232 aaPredicted RBP10.48□□□□□ -0.73
USP39-210ENST00000459775 FRMD8P1Q9BZ68 369 aaPredicted RBP10.48□□□□□ -0.73
USP39-210ENST00000459775 SP110Q9HB58 689 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 ETNK1Q9HBU6 452 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 RAB6BQ9NRW1 208 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 RBM22Q9NW64 420 aaKnown RBP eCLIP10.48□□□□□ -0.73
USP39-210ENST00000459775 TBC1D14Q9P2M4 693 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 DOCK4Q8N1I0 1966 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 KMT2EQ8IZD2 1858 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 ILVBLA1L0T0 632 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 FAM187AA6NFU0 413 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 C2orf81A6NN90 581 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 STK25O00506 426 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 SMAD6O43541 496 aaKnown RBP10.48□□□□□ -0.73
USP39-210ENST00000459775 BANF1O75531 89 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 HLA-DQB2P05538 268 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 ADH5P11766 374 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 PSMC3P17980 439 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 PSMB4P28070 264 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 RGRP47804 291 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 ITGA8P53708 1063 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 OXCT1P55809 520 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 BASP1P80723 227 aaKnown RBP10.48□□□□□ -0.73
USP39-210ENST00000459775 HTR4Q13639 388 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 HLTFQ14527 1009 aaKnown RBP eCLIP10.48□□□□□ -0.73
USP39-210ENST00000459775 GEN1Q17RS7 908 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 PARP15Q460N3 678 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 FUT11Q495W5 492 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 GLE1Q53GS7 698 aaKnown RBP10.48□□□□□ -0.73
USP39-210ENST00000459775 UBAP2Q5T6F2 1119 aaKnown RBP10.48□□□□□ -0.73
USP39-210ENST00000459775 KDELC2Q7Z4H8 507 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 TSEN2Q8NCE0 465 aaKnown RBP10.48□□□□□ -0.73
USP39-210ENST00000459775 FIBINQ8TAL6 211 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 FBXO25Q8TCJ0 367 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms