RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 C9orf16Q9BUW7 83 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 PRRG3Q9BZD7 231 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 NDEL1Q9GZM8 345 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 RIBC2Q9H4K1 309 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 ASAH2Q9NR71 780 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 SLC17A7Q9P2U7 560 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 PRKAG3Q9UGI9 489 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 PAIP2BQ9ULR5 123 aaKnown RBP11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 VWA7Q9Y334 891 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 MRPS23Q9Y3D9 190 aaKnown RBP11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 ANKDD1BA6NHY2 528 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 TNFAIP8O95379 198 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 RPN2P04844 631 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 PABPC1P11940 636 aaKnown RBP11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 COX4I1P13073 169 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 CTPS1P17812 591 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 FGFR3P22607 806 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 KRT20P35900 424 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 MAPK8P45983 427 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 MAPK9P45984 424 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 DEFB115Q30KQ5 88 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 CFAP52Q8N1V2 620 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 MSL3Q8N5Y2 521 aaKnown RBP11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 ZNF557Q8N988 423 aaPredicted RBP11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 REPS1Q96D71 796 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 CAB39LQ9H9S4 337 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 PAPOLBQ9NRJ5 636 aaKnown RBP11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 BTRCQ9Y297 605 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 KLHL20Q9Y2M5 609 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 RAP2CQ9Y3L5 183 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 RGSL1A5PLK6 1076 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 SRRM3A6NNA2 597 aaPredicted RBP11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 SLC9A3R1O14745 358 aaPredicted RBP11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 LYPLA1O75608 230 aaPredicted RBP11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 C2P06681 752 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 GRK4P32298 578 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 USP4Q13107 963 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 GALNT3Q14435 633 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 FAM187BQ17R55 369 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 XYLT1Q86Y38 959 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 ZNF398Q8TD17 642 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 ST6GALNAC4Q9H4F1 302 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 RABGEF1Q9UJ41 708 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 AGO1Q9UL18 857 aaKnown RBP11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 MYRFQ9Y2G1 1151 aa11.83□□□□□ -0.52
SMARCAD1-204ENST00000457823 BTBD19C9JJ37 291 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 FAM20BO75063 409 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 ANXA6P08133 673 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 OR4Q2P0C623 313 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 NOS3P29474 1203 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 PSME3P61289 254 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 TAF10Q12962 218 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 TCEA2Q15560 299 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 MAPKAPK3Q16644 382 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 FAM110CQ1W6H9 321 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 BRMS1LQ5PSV4 323 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 CLVS1Q8IUQ0 354 aaPredicted RBP11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 PLD5Q8N7P1 536 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 NIFKQ9BYG3 293 aaKnown RBP11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 PLK2Q9NYY3 685 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 STK39Q9UEW8 545 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 ANAPC2Q9UJX6 822 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 EFR3BQ9Y2G0 817 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 ZNF839A8K0R7 811 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 PAX3P23760 479 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 ARL2P36404 184 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 GUCA1AP43080 201 aaPredicted RBP11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 PRKAG1P54619 331 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 CPSF6Q16630 551 aaKnown RBP eCLIP11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 TEX44Q53QW1 395 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 PMF1Q6P1K2 205 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 SERPINA13PQ6UXR4 307 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 C10orf107Q8IVU9 208 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 DPP10Q8N608 796 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 GLOD4Q9HC38 313 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 EDF1O60869 148 aaKnown RBP11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 EPN2O95208 641 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 MMP3P08254 477 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 THOP1P52888 689 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 ITGA7Q13683 1181 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 UBAP2LQ14157 1087 aaKnown RBP11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 NPY5RQ15761 445 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 PAGE2BQ5JRK9 111 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 CNSTQ6PJW8 725 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 AFTPHQ6ULP2 937 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 APTXQ7Z2E3 356 aaKnown RBP11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 RORBQ92753 470 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 VMP1Q96GC9 406 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 DDX18Q9NVP1 670 aaKnown RBP11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 COPG2Q9UBF2 871 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 SLC12A4Q9UP95 1085 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 USP2O75604 605 aaPredicted RBP11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 MLYCDO95822 493 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 BCL10O95999 233 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 CDC25CP30307 473 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 NOGQ13253 232 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 USP39Q53GS9 565 aaKnown RBP11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 CASP12Q6UXS9 341 aa11.82□□□□□ -0.52
SMARCAD1-204ENST00000457823 OR6K2Q8NGY2 324 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms