RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 MAP3K13O43283 966 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 GRID2O43424 1007 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 NRP2O60462 931 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 DLX3O60479 287 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 USP12O75317 370 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 GMNNO75496 209 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 TRMUO75648 421 aaKnown RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 IPO13O94829 963 aaKnown RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 PAPSS2O95340 614 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 BMP10O95393 424 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 H6PDO95479 791 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ITGBL1O95965 494 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 PRKCGP05129 697 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 RPLP2P05387 115 aaKnown RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 SMIM18P0DKX4 95 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 SMIM10L2AP0DMW4 78 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 SMIM10L2BP0DMW5 78 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC2A3P11169 496 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ODC1P11926 461 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 HOXD8P13378 290 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ETS2P15036 469 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF23P17027 643 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 TPH1P17752 444 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 TCN1P20061 433 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 AKAP5P24588 427 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 LMO2P25791 158 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 NMBRP28336 390 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 TKTP29401 623 aaKnown RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 LRPAP1P30533 357 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC26A3P40879 764 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC1A2P43004 574 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ABCG1P45844 678 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 PSMD8P48556 350 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 CXCR3P49682 368 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 CDK9P50750 372 aaKnown RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 CRYBB1P53674 252 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 INHBCP55103 352 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 NME5P56597 212 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 RAB15P59190 212 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 LILRA4P59901 499 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 PRAMEP78395 509 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 HPCAP84074 193 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 TSPY1Q01534 308 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 PFKPQ01813 784 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 RHDQ02161 417 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 NSUN2Q08J23 767 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 SEMA3BQ13214 749 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 APOFQ13790 326 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 CEACAM7Q14002 265 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 CSHL1Q14406 222 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 POU6F1Q14863 301 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 SNX17Q15036 470 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ACAP2Q15057 778 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 RPS6KA2Q15349 733 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 DLG2Q15700 870 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZBTB6Q15916 424 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF792Q3KQV3 632 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 USP41Q3LFD5 358 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 NADK2Q4G0N4 442 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 DUSP28Q4G0W2 176 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 KCTD21Q4G0X4 260 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 AGKQ53H12 422 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 TBCELQ5QJ74 424 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 PPM1LQ5SGD2 360 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 C6orf52Q5T4I8 152 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ACBD5Q5T8D3 534 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 BTBD8Q5XKL5 378 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 OLFML2BQ68BL8 750 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 IQSEC1Q6DN90 963 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 NEPROQ6NW34 567 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 FBXL19Q6PCT2 694 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 IYDQ6PHW0 289 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ALKAL1Q6UXT8 129 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 NAPRTQ6XQN6 538 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 GK5Q6ZS86 529 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZBTB49Q6ZSB9 765 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 CLEC20AQ6ZU45 233 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 BEND5Q7L4P6 421 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 BNIPLQ7Z465 357 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 LIMS2Q7Z4I7 341 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 GALNT7Q86SF2 657 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 CUZD1Q86UP6 607 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 CAMK1DQ8IU85 385 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ERI1Q8IV48 349 aaKnown RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 HERC6Q8IVU3 1022 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 HOMEZQ8IX15 550 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 AQP12AQ8IXF9 295 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 NUP93Q8N1F7 819 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 THEM5Q8N1Q8 247 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 SCML4Q8N228 414 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 PLD6Q8N2A8 252 aaKnown RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 MIER2Q8N344 545 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 BBS5Q8N3I7 341 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 EFCAB3Q8N7B9 438 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 ANKFN1Q8N957 763 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 C2CD4AQ8NCU7 369 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 OR2T34Q8NGX1 318 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 OR2T3Q8NH03 318 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 MAPK15Q8TD08 544 aa3.36□□□□□ -1.87
HMGN1P18-201ENST00000457642 USP33Q8TEY7 942 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms