RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 HAUS2Q9NVX0 235 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 SEPT3Q9UH03 358 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 ADAMTS9Q9P2N4 1935 aa23.5■■□□□ 1.35
CBX3-204ENST00000456948 A0A1W2PQU0 124 aa23.49■■□□□ 1.35
CBX3-204ENST00000456948 C16orf96A6NNT2 1141 aa23.49■■□□□ 1.35
CBX3-204ENST00000456948 TSPAN6O43657 245 aa23.49■■□□□ 1.35
CBX3-204ENST00000456948 NOP2P46087 812 aaKnown RBP23.49■■□□□ 1.35
CBX3-204ENST00000456948 TAS2R38P59533 333 aa23.49■■□□□ 1.35
CBX3-204ENST00000456948 NSUN2Q08J23 767 aaKnown RBP eCLIP23.49■■□□□ 1.35
CBX3-204ENST00000456948 TCEAL1Q15170 157 aa23.49■■□□□ 1.35
CBX3-204ENST00000456948 HLA-BQ31612 363 aa23.49■■□□□ 1.35
CBX3-204ENST00000456948 TXNRD3NBQ6F5E7 133 aa23.49■■□□□ 1.35
CBX3-204ENST00000456948 TTC7BQ86TV6 843 aa23.49■■□□□ 1.35
CBX3-204ENST00000456948 GAS2L3Q86XJ1 694 aa23.49■■□□□ 1.35
CBX3-204ENST00000456948 ATPAF2Q8N5M1 289 aa23.49■■□□□ 1.35
CBX3-204ENST00000456948 PAF1Q8N7H5 531 aa23.49■■□□□ 1.35
CBX3-204ENST00000456948 FAM71BQ8TC56 605 aa23.49■■□□□ 1.35
CBX3-204ENST00000456948 SLC6A18Q96N87 628 aa23.49■■□□□ 1.35
CBX3-204ENST00000456948 KLHL32Q96NJ5 620 aa23.49■■□□□ 1.35
CBX3-204ENST00000456948 TUBGCP5Q96RT8 1024 aa23.49■■□□□ 1.35
CBX3-204ENST00000456948 ORAI3Q9BRQ5 295 aa23.49■■□□□ 1.35
CBX3-204ENST00000456948 ZNF670Q9BS34 389 aa23.49■■□□□ 1.35
CBX3-204ENST00000456948 KNL1Q8NG31 2342 aa23.49■■□□□ 1.35
CBX3-204ENST00000456948 ASCC3Q8N3C0 2202 aaKnown RBP23.48■■□□□ 1.35
CBX3-204ENST00000456948 CEACAM1P13688 526 aa23.48■■□□□ 1.35
CBX3-204ENST00000456948 AKT2P31751 481 aa23.48■■□□□ 1.35
CBX3-204ENST00000456948 HSPA9P38646 679 aaKnown RBP23.48■■□□□ 1.35
CBX3-204ENST00000456948 CSNK1DP48730 415 aa23.48■■□□□ 1.35
CBX3-204ENST00000456948 PPP2CBP62714 309 aa23.48■■□□□ 1.35
CBX3-204ENST00000456948 PPP2CAP67775 309 aa23.48■■□□□ 1.35
CBX3-204ENST00000456948 KIF19Q2TAC6 998 aa23.48■■□□□ 1.35
CBX3-204ENST00000456948 IQCHQ86VS3 1027 aa23.48■■□□□ 1.35
CBX3-204ENST00000456948 NPWQ8N729 165 aa23.48■■□□□ 1.35
CBX3-204ENST00000456948 MFSD2AQ8NA29 543 aa23.48■■□□□ 1.35
CBX3-204ENST00000456948 FAM174AQ8TBP5 190 aa23.48■■□□□ 1.35
CBX3-204ENST00000456948 TSC1Q92574 1164 aa23.48■■□□□ 1.35
CBX3-204ENST00000456948 ZNF641Q96N77 438 aaPredicted RBP23.48■■□□□ 1.35
CBX3-204ENST00000456948 MAK16Q9BXY0 300 aaKnown RBP23.48■■□□□ 1.35
CBX3-204ENST00000456948 DKK3Q9UBP4 350 aa23.48■■□□□ 1.35
CBX3-204ENST00000456948 SPTBN2O15020 2390 aa23.48■■□□□ 1.35
CBX3-204ENST00000456948 PCDH15Q96QU1 1955 aa23.47■■□□□ 1.35
CBX3-204ENST00000456948 KCNK5O95279 499 aa23.47■■□□□ 1.35
CBX3-204ENST00000456948 GKP32189 559 aa23.47■■□□□ 1.35
CBX3-204ENST00000456948 NOVA1P51513 510 aaKnown RBP23.47■■□□□ 1.35
CBX3-204ENST00000456948 SGCGQ13326 291 aa23.47■■□□□ 1.35
CBX3-204ENST00000456948 DPYSL3Q14195 570 aa23.47■■□□□ 1.35
CBX3-204ENST00000456948 ZNF235Q14590 738 aa23.47■■□□□ 1.35
CBX3-204ENST00000456948 PARS2Q7L3T8 475 aaKnown RBP23.47■■□□□ 1.35
CBX3-204ENST00000456948 CALR3Q96L12 384 aaKnown RBP23.47■■□□□ 1.35
CBX3-204ENST00000456948 ATP13A3Q9H7F0 1226 aa23.47■■□□□ 1.35
CBX3-204ENST00000456948 GDF3Q9NR23 364 aa23.47■■□□□ 1.35
CBX3-204ENST00000456948 LHX3Q9UBR4 397 aa23.47■■□□□ 1.35
CBX3-204ENST00000456948 PCDHB9Q9Y5E1 797 aa23.47■■□□□ 1.35
CBX3-204ENST00000456948 PCDHA13Q9Y5I0 950 aa23.47■■□□□ 1.35
CBX3-204ENST00000456948 FADS3Q9Y5Q0 445 aa23.47■■□□□ 1.35
CBX3-204ENST00000456948 SNX11Q9Y5W9 270 aa23.47■■□□□ 1.35
CBX3-204ENST00000456948 EPN1Q9Y6I3 576 aaPredicted RBP23.47■■□□□ 1.35
CBX3-204ENST00000456948 C10orf142B7Z368 130 aa23.46■■□□□ 1.35
CBX3-204ENST00000456948 TLR4O00206 839 aa23.46■■□□□ 1.35
CBX3-204ENST00000456948 SLC31A1O15431 190 aa23.46■■□□□ 1.35
CBX3-204ENST00000456948 LCA5LO95447 670 aa23.46■■□□□ 1.35
CBX3-204ENST00000456948 SERPINA4P29622 427 aa23.46■■□□□ 1.35
CBX3-204ENST00000456948 TAS2R40P59535 323 aa23.46■■□□□ 1.35
CBX3-204ENST00000456948 LBRQ14739 615 aaKnown RBP23.46■■□□□ 1.35
CBX3-204ENST00000456948 ANKRD20A8PQ5CZ79 823 aa23.46■■□□□ 1.35
CBX3-204ENST00000456948 LRRC38Q5VT99 294 aa23.46■■□□□ 1.35
CBX3-204ENST00000456948 SRLQ86TD4 932 aa23.46■■□□□ 1.35
CBX3-204ENST00000456948 OXR1Q8N573 874 aa23.46■■□□□ 1.35
CBX3-204ENST00000456948 EXOC2Q96KP1 924 aa23.46■■□□□ 1.35
CBX3-204ENST00000456948 SUV39H2Q9H5I1 410 aa23.46■■□□□ 1.35
CBX3-204ENST00000456948 EBF2Q9HAK2 575 aa23.46■■□□□ 1.35
CBX3-204ENST00000456948 TM7SF3Q9NS93 570 aa23.46■■□□□ 1.35
CBX3-204ENST00000456948 DDX56Q9NY93 547 aaKnown RBP23.46■■□□□ 1.35
CBX3-204ENST00000456948 IMPACTQ9P2X3 320 aa23.46■■□□□ 1.35
CBX3-204ENST00000456948 PCDHGB2Q9Y5G2 931 aa23.46■■□□□ 1.35
CBX3-204ENST00000456948 YKT6O15498 198 aa23.45■■□□□ 1.34
CBX3-204ENST00000456948 SPOPO43791 374 aa23.45■■□□□ 1.34
CBX3-204ENST00000456948 MX2P20592 715 aa23.45■■□□□ 1.34
CBX3-204ENST00000456948 HNRNPA2B1P22626 353 aaKnown RBP23.45■■□□□ 1.34
CBX3-204ENST00000456948 IL4RP24394 825 aa23.45■■□□□ 1.34
CBX3-204ENST00000456948 CTSKP43235 329 aa23.45■■□□□ 1.34
CBX3-204ENST00000456948 ARSEP51690 589 aa23.45■■□□□ 1.34
CBX3-204ENST00000456948 POLR2LP62875 67 aaKnown RBP23.45■■□□□ 1.34
CBX3-204ENST00000456948 ELP6Q0PNE2 266 aa23.45■■□□□ 1.34
CBX3-204ENST00000456948 INAVAQ3KP66 663 aa23.45■■□□□ 1.34
CBX3-204ENST00000456948 ATP13A4Q4VNC1 1196 aa23.45■■□□□ 1.34
CBX3-204ENST00000456948 TIGD7Q6NT04 549 aaPredicted RBP23.45■■□□□ 1.34
CBX3-204ENST00000456948 PSAPL1Q6NUJ1 521 aa23.45■■□□□ 1.34
CBX3-204ENST00000456948 BRAT1Q6PJG6 821 aa23.45■■□□□ 1.34
CBX3-204ENST00000456948 RHOT1Q8IXI2 618 aa23.45■■□□□ 1.34
CBX3-204ENST00000456948 TXLNBQ8N3L3 684 aa23.45■■□□□ 1.34
CBX3-204ENST00000456948 OR2I1PQ8NGU4 316 aa23.45■■□□□ 1.34
CBX3-204ENST00000456948 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.45■■□□□ 1.34
CBX3-204ENST00000456948 ZNF830Q96NB3 372 aaPredicted RBP23.45■■□□□ 1.34
CBX3-204ENST00000456948 PSKH2Q96QS6 385 aa23.45■■□□□ 1.34
CBX3-204ENST00000456948 SLC17A9Q9BYT1 436 aa23.45■■□□□ 1.34
CBX3-204ENST00000456948 ETNK2Q9NVF9 386 aa23.45■■□□□ 1.34
CBX3-204ENST00000456948 TRPM6Q9BX84 2022 aa23.45■■□□□ 1.34
CBX3-204ENST00000456948 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.44■■□□□ 1.34
CBX3-204ENST00000456948 NEBLO76041 1014 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms