RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 AGAP3Q96P47 875 aa18.09■□□□□ 0.49
FAM239A-203ENST00000456563 PRRX2Q99811 253 aa18.09■□□□□ 0.49
FAM239A-203ENST00000456563 SEMA3CQ99985 751 aa18.09■□□□□ 0.49
FAM239A-203ENST00000456563 TMEM121Q9BTD3 319 aa18.09■□□□□ 0.49
FAM239A-203ENST00000456563 PABPC3Q9H361 631 aaKnown RBP18.09■□□□□ 0.49
FAM239A-203ENST00000456563 NOD2Q9HC29 1040 aa18.09■□□□□ 0.49
FAM239A-203ENST00000456563 SCUBE2Q9NQ36 999 aa18.09■□□□□ 0.49
FAM239A-203ENST00000456563 ITM2CQ9NQX7 267 aa18.09■□□□□ 0.49
FAM239A-203ENST00000456563 CACNA1IQ9P0X4 2223 aa18.08■□□□□ 0.49
FAM239A-203ENST00000456563 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.08■□□□□ 0.48
FAM239A-203ENST00000456563 C5orf60A6NFR6 353 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 MID1O15344 667 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 GJB3O75712 270 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 STK10O94804 968 aaKnown RBP18.08■□□□□ 0.48
FAM239A-203ENST00000456563 SP9P0CG40 484 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 ACADMP11310 421 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 PAFAH1B1P43034 410 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 SFSWAPQ12872 951 aaKnown RBP18.08■□□□□ 0.48
FAM239A-203ENST00000456563 SNX1Q13596 522 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 GDPD4Q6W3E5 623 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 PID1Q7Z2X4 250 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 LONP2Q86WA8 852 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 C12orf50Q8NA57 414 aaPredicted RBP18.08■□□□□ 0.48
FAM239A-203ENST00000456563 RTP4Q96DX8 246 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 CAPZA3Q96KX2 299 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 NSMCE3Q96MG7 304 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 ZNF641Q96N77 438 aaPredicted RBP18.08■□□□□ 0.48
FAM239A-203ENST00000456563 AP1M1Q9BXS5 423 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 TPSD1Q9BZJ3 242 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 ATP13A3Q9H7F0 1226 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 GLOD4Q9HC38 313 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 USP36Q9P275 1121 aaKnown RBP18.08■□□□□ 0.48
FAM239A-203ENST00000456563 KLHL8Q9P2G9 620 aaPredicted RBP18.08■□□□□ 0.48
FAM239A-203ENST00000456563 ZNF148Q9UQR1 794 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 TTLL3Q9Y4R7 772 aa18.08■□□□□ 0.48
FAM239A-203ENST00000456563 GOLGA6L10A0A0M3HER8 536 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 TTC24A2A3L6 582 aaPredicted RBP18.07■□□□□ 0.48
FAM239A-203ENST00000456563 KPNA3O00505 521 aaPredicted RBP18.07■□□□□ 0.48
FAM239A-203ENST00000456563 ZNF217O75362 1048 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 IGLV3-19P01714 112 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 UGT2B4P06133 528 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 CD68P34810 354 aaPredicted RBP18.07■□□□□ 0.48
FAM239A-203ENST00000456563 FNTBP49356 437 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 GDF10P55107 478 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 DSC2Q02487 901 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 BCL2L1Q07817 233 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 NIPAL4Q0D2K0 466 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 TTC31Q49AM3 519 aaPredicted RBP18.07■□□□□ 0.48
FAM239A-203ENST00000456563 ZNF805Q5CZA5 627 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 ANKRD20A2Q5SQ80 823 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 FAM182AQ5T1J6 154 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 ANKRD20A1Q5TYW2 823 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 ANKRD20A3Q5VUR7 823 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 USP30Q70CQ3 517 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 CACUL1Q86Y37 369 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 CAMK1DQ8IU85 385 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 FAM71DQ8N9W8 422 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 HCAR2Q8TDS4 363 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 MAGOHBQ96A72 148 aaKnown RBP18.07■□□□□ 0.48
FAM239A-203ENST00000456563 FAM131CQ96AQ9 280 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 IMP4Q96G21 291 aaKnown RBP18.07■□□□□ 0.48
FAM239A-203ENST00000456563 PPP1R16AQ96I34 528 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 SPATA13Q96N96 652 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 SLC25A51Q9H1U9 297 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 SUV39H2Q9H5I1 410 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 DKK3Q9UBP4 350 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 CUL9Q8IWT3 2517 aa18.07■□□□□ 0.48
FAM239A-203ENST00000456563 OPHN1O60890 802 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 SOCS5O75159 536 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 GCATO75600 419 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 PIGNO95427 931 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 ITGB7P26010 798 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 SERPINA4P29622 427 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 DRD3P35462 400 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 TPMTP51580 245 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 METAP1P53582 386 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 SLC14A2Q15849 920 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 ITPRIPL1Q6GPH6 555 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 KBTBD6Q86V97 674 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 AADATQ8N5Z0 425 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 ARRDC3Q96B67 414 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 TADA1Q96BN2 335 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 KLHL32Q96NJ5 620 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 FCRL5Q96RD9 977 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 OMDQ99983 421 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 HDAC8Q9BY41 377 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 DYRK4Q9NR20 520 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 ZSCAN32Q9NX65 697 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 FBXL12Q9NXK8 326 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 ZNF318Q5VUA4 2279 aa18.06■□□□□ 0.48
FAM239A-203ENST00000456563 A0A1W2PP55 124 aa18.05■□□□□ 0.48
FAM239A-203ENST00000456563 A0A1W2PQ67 120 aa18.05■□□□□ 0.48
FAM239A-203ENST00000456563 TSPAN11A1L157 253 aa18.05■□□□□ 0.48
FAM239A-203ENST00000456563 PDE2AO00408 941 aaPredicted RBP18.05■□□□□ 0.48
FAM239A-203ENST00000456563 TRAFD1O14545 582 aaPredicted RBP18.05■□□□□ 0.48
FAM239A-203ENST00000456563 HTRA2O43464 458 aaPredicted RBP18.05■□□□□ 0.48
FAM239A-203ENST00000456563 PHF2O75151 1096 aa18.05■□□□□ 0.48
FAM239A-203ENST00000456563 MMP2P08253 660 aa18.05■□□□□ 0.48
FAM239A-203ENST00000456563 SERPINF2P08697 491 aa18.05■□□□□ 0.48
FAM239A-203ENST00000456563 NFKB1P19838 968 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms