RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 MED10Q9BTT4 135 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 RSPH9Q9H1X1 276 aaPredicted RBP5.03□□□□□ -1.6
RIF1-207ENST00000454583 ZWILCHQ9H900 591 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 KCNK13Q9HB14 408 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 LRRC4Q9HBW1 653 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 PCSK1NQ9UHG2 260 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 MBD1Q9UIS9 605 aaPredicted RBP5.03□□□□□ -1.6
RIF1-207ENST00000454583 SARDHQ9UL12 918 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 TRAV19A0A0A6YYK7 116 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 HEPACAM2A8MVW5 462 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 EEF2KO00418 725 aaKnown RBP5.03□□□□□ -1.6
RIF1-207ENST00000454583 AREL1O15033 823 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 NARSO43776 548 aaKnown RBP5.03□□□□□ -1.6
RIF1-207ENST00000454583 RASSF9O75901 435 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 TJP3O95049 919 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 NR1D1P20393 614 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 CSKP41240 450 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 ADARP55265 1226 aaKnown RBP5.03□□□□□ -1.6
RIF1-207ENST00000454583 PPP2R2AP63151 447 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 COG7P83436 770 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 TRAF2Q12933 501 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 ZXDCQ2QGD7 858 aaPredicted RBP5.03□□□□□ -1.6
RIF1-207ENST00000454583 PIP5KL1Q5T9C9 394 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 BTBD8Q5XKL5 378 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 METTL3Q86U44 580 aaKnown RBP5.03□□□□□ -1.6
RIF1-207ENST00000454583 DENND1CQ8IV53 801 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 CCDC13Q8IYE1 715 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 MAB21L3Q8N8X9 362 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 COQ10AQ96MF6 247 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 GDAP1L1Q96MZ0 367 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 LBHD1Q9BQE6 289 aaPredicted RBP5.03□□□□□ -1.6
RIF1-207ENST00000454583 MTIF3Q9H2K0 278 aaKnown RBP5.03□□□□□ -1.6
RIF1-207ENST00000454583 POLR3BQ9NW08 1133 aaPredicted RBP5.03□□□□□ -1.6
RIF1-207ENST00000454583 SMOXQ9NWM0 555 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 TRPM5Q9NZQ8 1165 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 SNX24Q9Y343 169 aa5.03□□□□□ -1.6
RIF1-207ENST00000454583 PCYT1BQ9Y5K3 369 aaPredicted RBP5.03□□□□□ -1.6
RIF1-207ENST00000454583 ZNF318Q5VUA4 2279 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 A6NNZ2 444 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 IL9P15248 144 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 LHCGRP22888 699 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 TEAD1P28347 426 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 STIP1P31948 543 aaKnown RBP5.02□□□□□ -1.61
RIF1-207ENST00000454583 FOXN2P32314 431 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 ALDH1A3P47895 512 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 NUMBP49757 651 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 B4GALNT1Q00973 533 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 CCDC15Q0P6D6 951 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 TUBB3Q13509 450 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 SLMAPQ14BN4 828 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 PARP6Q2NL67 630 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 TUBB8Q3ZCM7 444 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 GPR158Q5T848 1215 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 TRIM68Q6AZZ1 485 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 PKN3Q6P5Z2 889 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 KANSL1Q7Z3B3 1105 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 TMC7Q7Z402 723 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 SUGP1Q8IWZ8 645 aaKnown RBP5.02□□□□□ -1.61
RIF1-207ENST00000454583 PELI3Q8N2H9 469 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 RIBC1Q8N443 379 aaPredicted RBP5.02□□□□□ -1.61
RIF1-207ENST00000454583 ATP6V0D2Q8N8Y2 350 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 BANPQ8N9N5 519 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 MAIP1Q8WWC4 291 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 RSAD2Q8WXG1 361 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 MYLIPQ8WY64 445 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 COX14Q96I36 57 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 VAT1Q99536 393 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 FAM118BQ9BPY3 351 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 PHF7Q9BWX1 381 aaPredicted RBP5.02□□□□□ -1.61
RIF1-207ENST00000454583 SLC25A51Q9H1U9 297 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 ETNK1Q9HBU6 452 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 CFAP97Q9P2B7 532 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 PRKAG2Q9UGJ0 569 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 CD207Q9UJ71 328 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 CEP83Q9Y592 693 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 SPO11Q9Y5K1 396 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 ZBBXA8MT70 800 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 K7ERQ8 282 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 SMAPO00193 183 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 ZNF195O14628 629 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 ECEL1O95672 775 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 CCNB1P14635 433 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 ZFXP17010 805 aaPredicted RBP5.02□□□□□ -1.61
RIF1-207ENST00000454583 DHX9Q08211 1270 aaKnown RBP5.02□□□□□ -1.61
RIF1-207ENST00000454583 FGL2Q14314 439 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 TMEM259Q4ZIN3 620 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 ARSIQ5FYB1 569 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 ADHFE1Q8IWW8 467 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 ZNF473Q8WTR7 871 aaKnown RBP5.02□□□□□ -1.61
RIF1-207ENST00000454583 DEPDC1BQ8WUY9 529 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 CKAP2Q8WWK9 683 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 LRRC45Q96CN5 670 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 MSANTD3Q96H12 275 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 NECTIN4Q96NY8 510 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 CORO1BQ9BR76 489 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 TRIM56Q9BRZ2 755 aaKnown RBP5.02□□□□□ -1.61
RIF1-207ENST00000454583 MYLK2Q9H1R3 596 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 TLE6Q9H808 572 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 EBF2Q9HAK2 575 aa5.02□□□□□ -1.61
RIF1-207ENST00000454583 ZNF180Q9UJW8 692 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms