RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 MORC3Q14149 939 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SPIDRQ14159 915 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 C15orf59Q2T9L4 293 aaPredicted RBP6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FAM72AQ5TYM5 149 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 NAA35Q5VZE5 725 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FAM72DQ6L9T8 149 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 KIAA1161Q6NSJ0 714 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RWDD4Q6NW29 188 aaKnown RBP6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 INO80CQ6PI98 192 aaPredicted RBP6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RD3Q7Z3Z2 195 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FAM72BQ86X60 149 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 Q8N9G6 341 aaPredicted RBP6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 EXD3Q8N9H8 876 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SLC20A1Q8WUM9 679 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PMEPA1Q969W9 287 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TSACCQ96A04 125 aaPredicted RBP6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CCDC34Q96HJ3 373 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PPP1R16AQ96I34 528 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CCDC114Q96M63 670 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 IL12RB2Q99665 862 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CPEB1Q9BZB8 566 aaKnown RBP6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 KLC2Q9H0B6 622 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 METTL5Q9NRN9 209 aaKnown RBP6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ARHGEF38Q9NXL2 777 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FOXJ2Q9P0K8 574 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 GULP1Q9UBP9 304 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 IPO11Q9UI26 975 aaKnown RBP6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 DNAI1Q9UI46 699 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ATXN7L1Q9ULK2 861 aaPredicted RBP6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TPX2Q9ULW0 747 aaKnown RBP6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 OR1A2Q9Y585 309 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FHOD1Q9Y613 1164 aa6.09□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ARHGEF17Q96PE2 2063 aaPredicted RBP6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PRAMEF33A0A0G2JMD5 474 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 A0A1W2PQM1 296 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 BICDL2A1A5D9 508 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 NEMP2A6NFY4 417 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 B4DGG1 531 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 FOXN3O00409 490 aaPredicted RBP6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 FPGTO14772 594 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PLD2O14939 933 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 INSIG1O15503 277 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PRAMEF10O60809 474 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TMCC1O94876 653 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 GLI1P08151 1106 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PON1P27169 355 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 SLC5A2P31639 672 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 L1CAMP32004 1257 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 NOS2P35228 1153 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CLCN1P35523 988 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 KRT9P35527 623 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ETV5P41161 510 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 VASPP50552 380 aaPredicted RBP6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CLCN6P51797 869 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 UCNP55089 124 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 OXCT1P55809 520 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PFN3P60673 137 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CAMK4Q16566 473 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 MEA1Q16626 185 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 EXOC3L4Q17RC7 722 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ALG11Q2TAA5 492 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 KLHL40Q2TBA0 621 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 C5orf22Q49AR2 442 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CARD16Q5EG05 197 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 EFHC1Q5JVL4 640 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 GBP6Q6ZN66 633 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CCDC81Q6ZN84 652 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TMPRSS9Q7Z410 1059 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 NOP9Q86U38 636 aaKnown RBP6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ZFAND4Q86XD8 727 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ZNF354CQ86Y25 554 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 XYLT1Q86Y38 959 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 HID1Q8IV36 788 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PCDH20Q8N6Y1 951 aaKnown RBP6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CCDC185Q8N715 623 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 TMIEQ8NEW7 156 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 GPT2Q8TD30 523 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 HTR3CQ8WXA8 447 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CPA5Q8WXQ8 436 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 MED8Q96G25 268 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 KLHL32Q96NJ5 620 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 SLC46A1Q96NT5 459 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 EPAS1Q99814 870 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 HEPHQ9BQS7 1158 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 DUSP23Q9BVJ7 150 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 BOCQ9BWV1 1114 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ZYG11BQ9C0D3 744 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 WDCPQ9H6R7 721 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ASNSD1Q9NWL6 643 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 DNAJC12Q9UKB3 198 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 STAP1Q9ULZ2 295 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 PCDHGC3Q9UN70 934 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 FARP1Q9Y4F1 1045 aaPredicted RBP6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ATP6V1DQ9Y5K8 247 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 MYO9AB2RTY4 2548 aa6.08□□□□□ -1.44
HLA-DPA3-207ENST00000454398 RP1L1Q8IWN7 2480 aaPredicted RBP6.07□□□□□ -1.44
HLA-DPA3-207ENST00000454398 IGLV3-10A0A075B6K4 115 aa6.07□□□□□ -1.44
HLA-DPA3-207ENST00000454398 CCDC187A0A096LP49 1063 aa6.07□□□□□ -1.44
HLA-DPA3-207ENST00000454398 ILVBLA1L0T0 632 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms