RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 GMEB2Q9UKD1 530 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 PCDHGA5Q9Y5G8 931 aa28.35■■■□□ 2.13
SMARCC1-203ENST00000454240 METTL12A8MUP2 240 aa28.34■■■□□ 2.13
SMARCC1-203ENST00000454240 C10orf142B7Z368 130 aa28.34■■■□□ 2.13
SMARCC1-203ENST00000454240 UGT2B4P06133 528 aa28.34■■■□□ 2.13
SMARCC1-203ENST00000454240 PECAM1P16284 738 aaPredicted RBP28.34■■■□□ 2.13
SMARCC1-203ENST00000454240 CR2P20023 1033 aa28.34■■■□□ 2.13
SMARCC1-203ENST00000454240 CETN2P41208 172 aa28.34■■■□□ 2.13
SMARCC1-203ENST00000454240 CCDC15Q0P6D6 951 aa28.34■■■□□ 2.13
SMARCC1-203ENST00000454240 GRM3Q14832 879 aa28.34■■■□□ 2.13
SMARCC1-203ENST00000454240 MEI1Q5TIA1 1274 aa28.34■■■□□ 2.13
SMARCC1-203ENST00000454240 DCAF12L1Q5VU92 463 aa28.34■■■□□ 2.13
SMARCC1-203ENST00000454240 REXO1L1PQ8IX06 675 aa28.34■■■□□ 2.13
SMARCC1-203ENST00000454240 OR14C36Q8NHC7 312 aa28.34■■■□□ 2.13
SMARCC1-203ENST00000454240 P3H4Q92791 437 aa28.34■■■□□ 2.13
SMARCC1-203ENST00000454240 HSPA12BQ96MM6 686 aa28.34■■■□□ 2.13
SMARCC1-203ENST00000454240 KDM4CQ9H3R0 1056 aa28.34■■■□□ 2.13
SMARCC1-203ENST00000454240 NCDNQ9UBB6 729 aa28.34■■■□□ 2.13
SMARCC1-203ENST00000454240 GON4LQ3T8J9 2241 aa28.33■■■□□ 2.13
SMARCC1-203ENST00000454240 BCLAF3A2AJT9 711 aaKnown RBP28.33■■■□□ 2.13
SMARCC1-203ENST00000454240 PPP1R12AO14974 1030 aaPredicted RBP28.33■■■□□ 2.13
SMARCC1-203ENST00000454240 PLRG1O43660 514 aaKnown RBP28.33■■■□□ 2.13
SMARCC1-203ENST00000454240 GFRA3O60609 400 aa28.33■■■□□ 2.13
SMARCC1-203ENST00000454240 CCNB1P14635 433 aa28.33■■■□□ 2.13
SMARCC1-203ENST00000454240 TAS2R38P59533 333 aa28.33■■■□□ 2.13
SMARCC1-203ENST00000454240 LYSMD4Q5XG99 296 aa28.33■■■□□ 2.13
SMARCC1-203ENST00000454240 ARMCX6Q7L4S7 300 aa28.33■■■□□ 2.13
SMARCC1-203ENST00000454240 TRIM58Q8NG06 486 aa28.33■■■□□ 2.13
SMARCC1-203ENST00000454240 OR2T34Q8NGX1 318 aa28.33■■■□□ 2.13
SMARCC1-203ENST00000454240 KLHL32Q96NJ5 620 aa28.33■■■□□ 2.13
SMARCC1-203ENST00000454240 TUBGCP5Q96RT8 1024 aa28.33■■■□□ 2.13
SMARCC1-203ENST00000454240 AMACRQ9UHK6 382 aa28.33■■■□□ 2.13
SMARCC1-203ENST00000454240 ZFHX2Q9C0A1 2572 aaPredicted RBP28.33■■■□□ 2.13
SMARCC1-203ENST00000454240 LRRC72A6NJI9 287 aa28.32■■■□□ 2.12
SMARCC1-203ENST00000454240 ZSCAN12O43309 604 aa28.32■■■□□ 2.12
SMARCC1-203ENST00000454240 SCNN1BP51168 640 aa28.32■■■□□ 2.12
SMARCC1-203ENST00000454240 ZNF211Q13398 564 aaPredicted RBP28.32■■■□□ 2.12
SMARCC1-203ENST00000454240 NCEH1Q6PIU2 408 aa28.32■■■□□ 2.12
SMARCC1-203ENST00000454240 PARS2Q7L3T8 475 aaKnown RBP28.32■■■□□ 2.12
SMARCC1-203ENST00000454240 NSMCE3Q96MG7 304 aa28.32■■■□□ 2.12
SMARCC1-203ENST00000454240 NUDCD1Q96RS6 583 aa28.32■■■□□ 2.12
SMARCC1-203ENST00000454240 ARRDC1-AS1Q9H2J1 176 aa28.32■■■□□ 2.12
SMARCC1-203ENST00000454240 C16orf96A6NNT2 1141 aa28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 APOC4-APOC2K7ER74 178 aa28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 GJB3O75712 270 aa28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 PIGNO95427 931 aa28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 APOC2P02655 101 aa28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 ITPKAP23677 461 aa28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 MAPK8P45983 427 aa28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 NEK3P51956 506 aa28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 AP1S1P61966 158 aa28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 CREB5Q02930 508 aa28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 AP1B1Q10567 949 aa28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 HCAR2Q8TDS4 363 aa28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 DNASE2BQ8WZ79 361 aa28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 ZNF641Q96N77 438 aaPredicted RBP28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 IL12RB2Q99665 862 aa28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 SUV39H2Q9H5I1 410 aa28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 NT5MQ9NPB1 228 aa28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 RBM22Q9NW64 420 aaKnown RBP eCLIP28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 DKK3Q9UBP4 350 aa28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 ZBTB32Q9Y2Y4 487 aaPredicted RBP28.31■■■□□ 2.12
SMARCC1-203ENST00000454240 DOCK9Q9BZ29 2069 aa28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 FAM47DPA6NHR8 397 aa28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 KCNK1O00180 336 aa28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 TJP3O95049 919 aa28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 ADRB3P13945 408 aa28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 MAXP61244 160 aa28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 IFI35P80217 286 aaPredicted RBP28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 RALGPS1Q5JS13 557 aa28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 SYCP2LQ5T4T6 812 aa28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 PEAR1Q5VY43 1037 aaPredicted RBP28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 KIAA0895LQ68EN5 471 aa28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 FBXL19Q6PCT2 694 aa28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 CYP2U1Q7Z449 544 aa28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 CAMK1DQ8IU85 385 aa28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 DCLK2Q8N568 766 aa28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 BIRC7Q96CA5 298 aa28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 HAUS1Q96CS2 278 aa28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 ATP13A3Q9H7F0 1226 aa28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 PILRBQ9UKJ0 227 aa28.3■■■□□ 2.12
SMARCC1-203ENST00000454240 TTC24A2A3L6 582 aaPredicted RBP28.29■■■□□ 2.12
SMARCC1-203ENST00000454240 JCHAINP01591 159 aa28.29■■■□□ 2.12
SMARCC1-203ENST00000454240 PRKD1Q15139 912 aaPredicted RBP28.29■■■□□ 2.12
SMARCC1-203ENST00000454240 RPS6KA1Q15418 735 aa28.29■■■□□ 2.12
SMARCC1-203ENST00000454240 PLA2G2CQ5R387 149 aa28.29■■■□□ 2.12
SMARCC1-203ENST00000454240 ALG1LQ6GMV1 187 aa28.29■■■□□ 2.12
SMARCC1-203ENST00000454240 SYT12Q8IV01 421 aa28.29■■■□□ 2.12
SMARCC1-203ENST00000454240 PREBQ9HCU5 417 aa28.29■■■□□ 2.12
SMARCC1-203ENST00000454240 SCUBE2Q9NQ36 999 aa28.29■■■□□ 2.12
SMARCC1-203ENST00000454240 TMEM74BQ9NUR3 256 aa28.29■■■□□ 2.12
SMARCC1-203ENST00000454240 ATP8A1Q9Y2Q0 1164 aa28.29■■■□□ 2.12
SMARCC1-203ENST00000454240 PI4KAP42356 2102 aa28.28■■■□□ 2.12
SMARCC1-203ENST00000454240 TBC1D3DA0A087WVF3 549 aa28.28■■■□□ 2.12
SMARCC1-203ENST00000454240 TBC1D3IA0A087WXS9 549 aa28.28■■■□□ 2.12
SMARCC1-203ENST00000454240 TBC1D3EA0A087X179 549 aa28.28■■■□□ 2.12
SMARCC1-203ENST00000454240 TBC1D3KA0A087X1G2 549 aa28.28■■■□□ 2.12
SMARCC1-203ENST00000454240 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP28.28■■■□□ 2.12
SMARCC1-203ENST00000454240 TSPAN11A1L157 253 aa28.28■■■□□ 2.12
SMARCC1-203ENST00000454240 TBC1D3FA6NER0 549 aaPredicted RBP28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms