RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CLEC4AQ9UMR7 237 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 STX8Q9UNK0 236 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 WASF3Q9UPY6 502 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 HPSEQ9Y251 543 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 RUVBL1Q9Y265 456 aaKnown RBP4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 STRAPQ9Y3F4 350 aaKnown RBP4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 ADAM18Q9Y3Q7 739 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 PLEKHM1Q9Y4G2 1056 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 IRAK3Q9Y616 596 aa4.54□□□□□ -1.68
HMGB3P21-201ENST00000452483 BRD4O60885 1362 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 RNF123Q5XPI4 1314 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 KIF16BQ96L93 1317 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 SALL3Q9BXA9 1300 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 LOC100509620A0A075B734 347 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 A0A0A6YYJ9 748 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 GOLGA6L7A0A1B0GV03 622 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 SH3D21A4FU49 640 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 HTR3EA5X5Y0 456 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 OOEPA6NGQ2 149 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 FAM47DPA6NHR8 397 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 CAPN14A8MX76 684 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 TMCO5BA8MYB1 307 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 FOXO6A8MYZ6 492 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 EIF3CLB5ME19 914 aaKnown RBP4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 STMND1H3BQB6 276 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 E2F3O00716 465 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 CXCL11O14625 94 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 PPEF2O14830 753 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 ADCY6O43306 1168 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 SMAD6O43541 496 aaKnown RBP4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 TAF5LO75529 589 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 SPAG6O75602 509 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 PRDM1O75626 825 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 AK1P00568 194 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 SERPINC1P01008 464 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 PDGFBP01127 241 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 URODP06132 367 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 ZFXP17010 805 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 EPORP19235 508 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 PI3P19957 117 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 JAK1P23458 1154 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 AHCYP23526 432 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 PSMA5P28066 241 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 ALDH4A1P30038 563 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 MCM5P33992 734 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 PDE1AP54750 535 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 CTXN1P60606 82 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 PMP22Q01453 160 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 GOLGA8FQ08AF8 430 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 DPYSQ14117 519 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 DOC2AQ14183 400 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 GAMTQ14353 236 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 CSHL1Q14406 222 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 SQLEQ14534 574 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 ZNF273Q14593 569 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 KARSQ15046 597 aaKnown RBP4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 WDR43Q15061 677 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 ZMYND11Q15326 602 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 DPYSL2Q16555 572 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 TBRG1Q3YBR2 411 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 CCDC152Q4G0S7 254 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 MFSD14BQ5SR56 506 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 C1orf185Q5T7R7 199 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 FCRL6Q6DN72 434 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 KIAA0930Q6ICG6 404 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 CLEC2AQ6UVW9 174 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 LCNL1Q6ZST4 164 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 TOM1L2Q6ZVM7 507 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 MED25Q71SY5 747 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 SPATA21Q7Z572 469 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 IQCHQ86VS3 1027 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 LRRC49Q8IUZ0 686 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 DENND6AQ8IWF6 608 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 DDIASQ8IXT1 998 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 ELMOD2Q8IZ81 293 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 UNC5BQ8IZJ1 945 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 CLYBLQ8N0X4 340 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 RASGEF1CQ8N431 466 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 MCUQ8NE86 351 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 OR13C2Q8NGS9 318 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 OR8K3Q8NH51 312 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 MDM1Q8TC05 714 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 HES6Q96HZ4 224 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 KLHL15Q96M94 604 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 GAL3ST1Q99999 423 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 SRSF8Q9BRL6 282 aaKnown RBP4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 MECRQ9BV79 373 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 KIFC3Q9BVG8 833 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 OSGEPL1Q9H4B0 414 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 CCDC134Q9H6E4 229 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 GORASP2Q9H8Y8 452 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 FAM114A2Q9NRY5 505 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 LANCL2Q9NS86 450 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 TMEM140Q9NV12 185 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 QPCTLQ9NXS2 382 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 CFAP97Q9P2B7 532 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 MYOTQ9UBF9 498 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 DKK4Q9UBT3 224 aa4.53□□□□□ -1.68
HMGB3P21-201ENST00000452483 FBXL17Q9UF56 701 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms