RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 BAHD1Q8TBE0 780 aaPredicted RBP9.82□□□□□ -0.84
USP54-207ENST00000451492 ISG20Q96AZ6 181 aaKnown RBP9.82□□□□□ -0.84
USP54-207ENST00000451492 KLHDC7BQ96G42 594 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 CNDP2Q96KP4 475 aaKnown RBP9.82□□□□□ -0.84
USP54-207ENST00000451492 WRAP53Q9BUR4 548 aaKnown RBP9.82□□□□□ -0.84
USP54-207ENST00000451492 SLC39A8Q9C0K1 460 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 ISCUQ9H1K1 167 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 RETREG1Q9H6L5 497 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 LRRC19Q9H756 370 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 SP110Q9HB58 689 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.82□□□□□ -0.84
USP54-207ENST00000451492 LHX3Q9UBR4 397 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 TPX2Q9ULW0 747 aaKnown RBP9.82□□□□□ -0.84
USP54-207ENST00000451492 CAPN11Q9UMQ6 739 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 FADS3Q9Y5Q0 445 aa9.82□□□□□ -0.84
USP54-207ENST00000451492 IGLON5A6NGN9 336 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 WASH4PA8MWX3 477 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 C10orf142B7Z368 130 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 RAD51BO15315 384 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 FFAR2O15552 330 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 PCDHGA12O60330 932 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 DFNA5O60443 496 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 TRIM16O95361 564 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 POP4O95707 220 aaKnown RBP9.81□□□□□ -0.84
USP54-207ENST00000451492 LDOC1O95751 146 aaPredicted RBP9.81□□□□□ -0.84
USP54-207ENST00000451492 PAK4O96013 591 aaPredicted RBP9.81□□□□□ -0.84
USP54-207ENST00000451492 IL1R2P27930 398 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 YBEYP58557 167 aaPredicted RBP9.81□□□□□ -0.84
USP54-207ENST00000451492 RPS21P63220 83 aaKnown RBP9.81□□□□□ -0.84
USP54-207ENST00000451492 FGL2Q14314 439 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 CYTH1Q15438 398 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 TMEM259Q4ZIN3 620 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 CFAP58Q5T655 872 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 TXNRD3NBQ6F5E7 133 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 KIAA1161Q6NSJ0 714 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 RAB44Q7Z6P3 723 aaPredicted RBP9.81□□□□□ -0.84
USP54-207ENST00000451492 TTC7BQ86TV6 843 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 CPNE8Q86YQ8 564 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 SLC22A18ASQ8N1D0 253 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 UMODL1-AS1Q8N2C9 162 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 CXorf40AQ8TE69 158 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 SAP25Q8TEE9 199 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 FNIP1Q8TF40 1166 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 FEM1CQ96JP0 617 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 CDC6Q99741 560 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 CINPQ9BW66 212 aaPredicted RBP9.81□□□□□ -0.84
USP54-207ENST00000451492 OSBPL1AQ9BXW6 950 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 SLC17A9Q9BYT1 436 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 DEF6Q9H4E7 631 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 ETNK2Q9NVF9 386 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 KLHL11Q9NVR0 708 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 TOR4AQ9NXH8 423 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 CWC15Q9P013 229 aaKnown RBP9.81□□□□□ -0.84
USP54-207ENST00000451492 COQ6Q9Y2Z9 468 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 NEUROG3Q9Y4Z2 214 aa9.81□□□□□ -0.84
USP54-207ENST00000451492 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.81□□□□□ -0.84
USP54-207ENST00000451492 BZW2Q9Y6E2 419 aaKnown RBP9.81□□□□□ -0.84
USP54-207ENST00000451492 MAP1BP46821 2468 aaKnown RBP9.81□□□□□ -0.84
USP54-207ENST00000451492 TTC24A2A3L6 582 aaPredicted RBP9.8□□□□□ -0.84
USP54-207ENST00000451492 FAM149AA5PLN7 773 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 POM121BA6NF01 834 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 A6NNZ2 444 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 TMEM110-MUSTN1A8MSY1 372 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 H3BRJ5 948 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 ENC1O14682 589 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 SPINT1O43278 529 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 CBFA2T2O43439 604 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 TNFSF14O43557 240 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 MAGEC1O60732 1142 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 PRAMEF11O60813 436 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 MMP20O60882 483 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 PALMO75781 387 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 KRT37O76014 449 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 RARAP10276 462 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 AMPD1P23109 780 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 HTR7P34969 479 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 NUDT1P36639 197 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 EIF4A3P38919 411 aaKnown RBP9.8□□□□□ -0.84
USP54-207ENST00000451492 ARL4AP40617 200 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 RGRP47804 291 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 NDST2P52849 883 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 SGCGQ13326 291 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 KRT81Q14533 505 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 TCEA2Q15560 299 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 NEK5Q6P3R8 708 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 ALKBH5Q6P6C2 394 aaKnown RBP9.8□□□□□ -0.84
USP54-207ENST00000451492 DHRS13Q6UX07 377 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 DBX2Q6ZNG2 339 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 Q6ZSR6 202 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 GLRX5Q86SX6 157 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 ARHGAP12Q8IWW6 846 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 OXR1Q8N573 874 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 TMEM145Q8NBT3 493 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 TSEN2Q8NCE0 465 aaKnown RBP9.8□□□□□ -0.84
USP54-207ENST00000451492 ZNF564Q8TBZ8 553 aaPredicted RBP9.8□□□□□ -0.84
USP54-207ENST00000451492 CASKIN2Q8WXE0 1202 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 ADAMTS14Q8WXS8 1223 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 ZCCHC14Q8WYQ9 949 aaKnown RBP9.8□□□□□ -0.84
USP54-207ENST00000451492 SYN2Q92777 582 aaPredicted RBP9.8□□□□□ -0.84
USP54-207ENST00000451492 GATA6Q92908 595 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms