RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.84■□□□□ 0.45
FAM3A-216ENST00000449971 TENM4Q6N022 2769 aa17.83■□□□□ 0.45
FAM3A-216ENST00000449971 CFAP46Q8IYW2 2715 aa17.83■□□□□ 0.45
FAM3A-216ENST00000449971 TEX51A0A1B0GUA7 166 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 CYSRT1A8MQ03 144 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 PLRG1O43660 514 aaKnown RBP17.83■□□□□ 0.44
FAM3A-216ENST00000449971 BUB1O43683 1085 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 KDELR3O43731 214 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 SDC3O75056 442 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 CD160O95971 181 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 GYPCP04921 128 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 CDK4P11802 303 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 EPHA8P29322 1005 aaPredicted RBP17.83■□□□□ 0.44
FAM3A-216ENST00000449971 CASP14P31944 242 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 ARRB1P49407 418 aaPredicted RBP17.83■□□□□ 0.44
FAM3A-216ENST00000449971 GEMIN4P57678 1058 aaKnown RBP17.83■□□□□ 0.44
FAM3A-216ENST00000449971 TPI1P60174 286 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 PPP2CBP62714 309 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 PPP2CAP67775 309 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 TLE3Q04726 772 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 CCDC15Q0P6D6 951 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 ERMARDQ5T6L9 678 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 AGBL4Q5VU57 503 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 PRPF39Q86UA1 669 aaKnown RBP17.83■□□□□ 0.44
FAM3A-216ENST00000449971 RYBPQ8N488 228 aaPredicted RBP17.83■□□□□ 0.44
FAM3A-216ENST00000449971 ARFGAP1Q8N6T3 406 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 FAM131CQ96AQ9 280 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 ARRDC3Q96B67 414 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 HEPHQ9BQS7 1158 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 TM6SF2Q9BZW4 377 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 KDM4CQ9H3R0 1056 aa17.83■□□□□ 0.44
FAM3A-216ENST00000449971 CXorf51AA0A1B0GTR3 108 aa17.82■□□□□ 0.44
FAM3A-216ENST00000449971 RNF103O00237 685 aa17.82■□□□□ 0.44
FAM3A-216ENST00000449971 CBFA2T2O43439 604 aa17.82■□□□□ 0.44
FAM3A-216ENST00000449971 PRPSAP2O60256 369 aa17.82■□□□□ 0.44
FAM3A-216ENST00000449971 LEFTY1O75610 366 aa17.82■□□□□ 0.44
FAM3A-216ENST00000449971 MIPP30301 263 aa17.82■□□□□ 0.44
FAM3A-216ENST00000449971 MAT2AP31153 395 aaKnown RBP17.82■□□□□ 0.44
FAM3A-216ENST00000449971 ACTN2P35609 894 aa17.82■□□□□ 0.44
FAM3A-216ENST00000449971 CA9Q16790 459 aa17.82■□□□□ 0.44
FAM3A-216ENST00000449971 RNF214Q8ND24 703 aa17.82■□□□□ 0.44
FAM3A-216ENST00000449971 FNIP1Q8TF40 1166 aa17.82■□□□□ 0.44
FAM3A-216ENST00000449971 TSC1Q92574 1164 aa17.82■□□□□ 0.44
FAM3A-216ENST00000449971 NOL6Q9H6R4 1146 aaKnown RBP17.82■□□□□ 0.44
FAM3A-216ENST00000449971 HECAQ9UBI9 543 aaPredicted RBP17.82■□□□□ 0.44
FAM3A-216ENST00000449971 TPX2Q9ULW0 747 aaKnown RBP17.82■□□□□ 0.44
FAM3A-216ENST00000449971 CLCA2Q9UQC9 943 aa17.82■□□□□ 0.44
FAM3A-216ENST00000449971 WASF2Q9Y6W5 498 aa17.82■□□□□ 0.44
FAM3A-216ENST00000449971 A0A087X0T9 212 aa17.81■□□□□ 0.44
FAM3A-216ENST00000449971 A0A1W2PR77 199 aa17.81■□□□□ 0.44
FAM3A-216ENST00000449971 WASH4PA8MWX3 477 aa17.81■□□□□ 0.44
FAM3A-216ENST00000449971 RASA4BC9J798 803 aa17.81■□□□□ 0.44
FAM3A-216ENST00000449971 TLR4O00206 839 aa17.81■□□□□ 0.44
FAM3A-216ENST00000449971 EEF2KO00418 725 aaKnown RBP17.81■□□□□ 0.44
FAM3A-216ENST00000449971 YKT6O15498 198 aa17.81■□□□□ 0.44
FAM3A-216ENST00000449971 FGF10O15520 208 aaPredicted RBP17.81■□□□□ 0.44
FAM3A-216ENST00000449971 DAPK3O43293 454 aa17.81■□□□□ 0.44
FAM3A-216ENST00000449971 RASA4O43374 803 aa17.81■□□□□ 0.44
FAM3A-216ENST00000449971 FAM228BP0C875 321 aa17.81■□□□□ 0.44
FAM3A-216ENST00000449971 HTR7P34969 479 aa17.81■□□□□ 0.44
FAM3A-216ENST00000449971 CCNHP51946 323 aaPredicted RBP17.81■□□□□ 0.44
FAM3A-216ENST00000449971 YBEYP58557 167 aaPredicted RBP17.81■□□□□ 0.44
FAM3A-216ENST00000449971 PIP5KL1Q5T9C9 394 aa17.81■□□□□ 0.44
FAM3A-216ENST00000449971 PCSK4Q6UW60 755 aa17.81■□□□□ 0.44
FAM3A-216ENST00000449971 ERN2Q76MJ5 926 aaKnown RBP17.81■□□□□ 0.44
FAM3A-216ENST00000449971 LSM14AQ8ND56 463 aaKnown RBP17.81■□□□□ 0.44
FAM3A-216ENST00000449971 ISG20Q96AZ6 181 aaKnown RBP17.81■□□□□ 0.44
FAM3A-216ENST00000449971 HMCESQ96FZ2 354 aa17.81■□□□□ 0.44
FAM3A-216ENST00000449971 PPP1R16AQ96I34 528 aa17.81■□□□□ 0.44
FAM3A-216ENST00000449971 PEBP4Q96S96 227 aa17.81■□□□□ 0.44
FAM3A-216ENST00000449971 SNRNP25Q9BV90 132 aaKnown RBP17.81■□□□□ 0.44
FAM3A-216ENST00000449971 KLC2Q9H0B6 622 aa17.81■□□□□ 0.44
FAM3A-216ENST00000449971 THAP2Q9H0W7 228 aa17.81■□□□□ 0.44
FAM3A-216ENST00000449971 ZDHHC6Q9H6R6 413 aa17.81■□□□□ 0.44
FAM3A-216ENST00000449971 COL5A1P20908 1838 aaPredicted RBP17.81■□□□□ 0.44
FAM3A-216ENST00000449971 ZSCAN5CA6NGD5 496 aaPredicted RBP17.8■□□□□ 0.44
FAM3A-216ENST00000449971 C10orf142B7Z368 130 aa17.8■□□□□ 0.44
FAM3A-216ENST00000449971 LATO43561 262 aa17.8■□□□□ 0.44
FAM3A-216ENST00000449971 RNGTTO60942 597 aaKnown RBP17.8■□□□□ 0.44
FAM3A-216ENST00000449971 CKMT2P17540 419 aa17.8■□□□□ 0.44
FAM3A-216ENST00000449971 NXPH1P58417 271 aa17.8■□□□□ 0.44
FAM3A-216ENST00000449971 TAS2R38P59533 333 aa17.8■□□□□ 0.44
FAM3A-216ENST00000449971 INSM1Q01101 510 aaPredicted RBP17.8■□□□□ 0.44
FAM3A-216ENST00000449971 TBC1D25Q3MII6 688 aa17.8■□□□□ 0.44
FAM3A-216ENST00000449971 PARP15Q460N3 678 aa17.8■□□□□ 0.44
FAM3A-216ENST00000449971 SLC45A4Q5BKX6 768 aa17.8■□□□□ 0.44
FAM3A-216ENST00000449971 PPP6R3Q5H9R7 873 aaPredicted RBP17.8■□□□□ 0.44
FAM3A-216ENST00000449971 CCDC122Q5T0U0 273 aa17.8■□□□□ 0.44
FAM3A-216ENST00000449971 ARHGAP40Q5TG30 622 aa17.8■□□□□ 0.44
FAM3A-216ENST00000449971 SPECC1LQ69YQ0 1117 aa17.8■□□□□ 0.44
FAM3A-216ENST00000449971 ALKBH5Q6P6C2 394 aaKnown RBP17.8■□□□□ 0.44
FAM3A-216ENST00000449971 UMODL1-AS1Q8N2C9 162 aa17.8■□□□□ 0.44
FAM3A-216ENST00000449971 OR6K2Q8NGY2 324 aa17.8■□□□□ 0.44
FAM3A-216ENST00000449971 KCTD15Q96SI1 283 aaPredicted RBP17.8■□□□□ 0.44
FAM3A-216ENST00000449971 NCAPGQ9BPX3 1015 aa17.8■□□□□ 0.44
FAM3A-216ENST00000449971 HDAC8Q9BY41 377 aa17.8■□□□□ 0.44
FAM3A-216ENST00000449971 CPNE5Q9HCH3 593 aa17.8■□□□□ 0.44
FAM3A-216ENST00000449971 PREBQ9HCU5 417 aa17.8■□□□□ 0.44
FAM3A-216ENST00000449971 DONSONQ9NYP3 566 aa17.8■□□□□ 0.44
FAM3A-216ENST00000449971 ARHGAP20Q9P2F6 1191 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms