RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 TRIM43BA6NCK2 446 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 DUSP11O75319 330 aaKnown RBP12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 CYP1A1P04798 512 aaPredicted RBP12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 ALDH4A1P30038 563 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 KCNJ5P48544 419 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 C16orf46Q6P387 395 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 VSIG10LQ86VR7 867 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 UNC93AQ86WB7 457 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 ZNF473Q8WTR7 871 aaKnown RBP12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 MYO19Q96H55 970 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 ISCUQ9H1K1 167 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 WHRNQ9P202 907 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 ZNF624Q9P2J8 865 aaPredicted RBP12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 HBS1LQ9Y450 684 aaKnown RBP12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 UGT2B4P06133 528 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 RAD9BQ6WBX8 426 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 PIGZQ86VD9 579 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 BEND7Q8N7W2 519 aaPredicted RBP12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 NDNQ99608 321 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 CIDEBQ9UHD4 219 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 MSI1O43347 362 aaKnown RBP12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 H2AFXP16104 143 aaPredicted RBP12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 OC90Q02509 493 aaPredicted RBP12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 SUZ12Q15022 739 aaKnown RBP12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 AAK1Q2M2I8 961 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 SMU1Q2TAY7 513 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 FAM98BQ52LJ0 330 aaKnown RBP12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 AGBL2Q5U5Z8 902 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 FUT10Q6P4F1 479 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 EID3Q8N140 333 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 OR8H2Q8N162 312 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 ATAD1Q8NBU5 361 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 NDUFAF1Q9Y375 327 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 A0A096LPK6 155 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 A8MU76 341 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 SLCO1B7G3V0H7 640 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 RBMXL2O75526 392 aaKnown RBP12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 KLHL18O94889 574 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 HNRNPCP07910 306 aaKnown RBP eCLIP12.85□□□□□ -0.352e-7■□□□□ 9
AC006001.3-201ENST00000449307 TTPAP49638 278 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 HNMTP50135 292 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 SLC12A3P55017 1021 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 CRADDP78560 199 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 MCL1Q07820 350 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 DUSP28Q4G0W2 176 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 SMYD1Q8NB12 490 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 PRCCQ92733 491 aaPredicted RBP12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 TBCBQ99426 244 aa12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 MRPL45Q9BRJ2 306 aaKnown RBP12.85□□□□□ -0.35
AC006001.3-201ENST00000449307 CCNYL3P0C7X3 344 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 GZMAP12544 262 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 IDSP22304 550 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 RBL1P28749 1068 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 CYP4F8P98187 520 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 TUSC3Q13454 348 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 ZNF571Q7Z3V5 609 aaPredicted RBP12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 FBXO15Q8NCQ5 510 aaPredicted RBP12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 OR52K1Q8NGK4 314 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 FAM45AQ8TCE6 357 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 UPF1Q92900 1129 aaKnown RBP eCLIP12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 NAALADL1Q9UQQ1 740 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 BCL9O00512 1426 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 C19orf18Q8NEA5 215 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 LRRN4Q8WUT4 740 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 GAL3ST4Q96RP7 486 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 ERVW-1Q9UQF0 538 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 ANKRD6Q9Y2G4 727 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 BCLAF3A2AJT9 711 aaKnown RBP12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 GRXCR2A6NFK2 248 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 PLGP00747 810 aaPredicted RBP12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 C8AP07357 584 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 NT5EP21589 574 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 ELK3P41970 407 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 RPIAP49247 311 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 CAP1Q01518 475 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 ILF3Q12906 894 aaKnown RBP eCLIP12.84□□□□□ -0.352e-7■■■■□ 19.9
AC006001.3-201ENST00000449307 PUS10Q3MIT2 529 aaKnown RBP12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 TRAF7Q6Q0C0 670 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 AGGF1Q8N302 714 aaeCLIP12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 HCAR2Q8TDS4 363 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 STON1Q9Y6Q2 735 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 SLURP2P0DP57 97 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 LBX1P52954 281 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 EPS8Q12929 822 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 CAPSQ13938 189 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 FASTKQ14296 549 aaKnown RBP12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 IFNL1Q8IU54 200 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 CCDC103Q8IW40 242 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 TMEM51Q9NW97 253 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 C1RP00736 705 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 GIMD1P0DJR0 217 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 MC4RP32245 332 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 GRIK5Q16478 980 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 CCDC153Q494R4 210 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 SLC44A4Q53GD3 710 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 WDR18Q9BV38 432 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 LMAN2LQ9H0V9 348 aa12.84□□□□□ -0.35
AC006001.3-201ENST00000449307 PSMD13Q9UNM6 376 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms