RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 MYLK3Q32MK0 819 aa28.71■■■□□ 2.19
CBX4-202ENST00000448310 PARGQ86W56 976 aa28.71■■■□□ 2.19
CBX4-202ENST00000448310 PHF13Q86YI8 300 aaPredicted RBP28.71■■■□□ 2.19
CBX4-202ENST00000448310 NEK11Q8NG66 645 aa28.71■■■□□ 2.19
CBX4-202ENST00000448310 RAB7BQ96AH8 199 aa28.71■■■□□ 2.19
CBX4-202ENST00000448310 NOL6Q9H6R4 1146 aaKnown RBP28.71■■■□□ 2.19
CBX4-202ENST00000448310 IPO11Q9UI26 975 aaKnown RBP28.71■■■□□ 2.19
CBX4-202ENST00000448310 CCP110O43303 1012 aa28.7■■■□□ 2.18
CBX4-202ENST00000448310 BUB1O43683 1085 aa28.7■■■□□ 2.18
CBX4-202ENST00000448310 KDELR3O43731 214 aa28.7■■■□□ 2.18
CBX4-202ENST00000448310 OPA1O60313 960 aa28.7■■■□□ 2.18
CBX4-202ENST00000448310 CSF2P04141 144 aa28.7■■■□□ 2.18
CBX4-202ENST00000448310 NME1P15531 152 aaKnown RBP28.7■■■□□ 2.18
CBX4-202ENST00000448310 LRRC69Q6ZNQ3 347 aa28.7■■■□□ 2.18
CBX4-202ENST00000448310 SLFN11Q7Z7L1 901 aa28.7■■■□□ 2.18
CBX4-202ENST00000448310 C3orf20Q8ND61 904 aa28.7■■■□□ 2.18
CBX4-202ENST00000448310 LENG8Q96PV6 779 aaPredicted RBP28.7■■■□□ 2.18
CBX4-202ENST00000448310 KLC2Q9H0B6 622 aa28.7■■■□□ 2.18
CBX4-202ENST00000448310 DAAM1Q9Y4D1 1078 aa28.7■■■□□ 2.18
CBX4-202ENST00000448310 LRRK1Q38SD2 2015 aa28.69■■■□□ 2.18
CBX4-202ENST00000448310 TMCC1O94876 653 aa28.69■■■□□ 2.18
CBX4-202ENST00000448310 POP4O95707 220 aaKnown RBP28.69■■■□□ 2.18
CBX4-202ENST00000448310 CALB1P05937 261 aa28.69■■■□□ 2.18
CBX4-202ENST00000448310 SCYL2Q6P3W7 929 aa28.69■■■□□ 2.18
CBX4-202ENST00000448310 SNIP1Q8TAD8 396 aaKnown RBP28.69■■■□□ 2.18
CBX4-202ENST00000448310 H3BM21 787 aa28.68■■■□□ 2.18
CBX4-202ENST00000448310 ITIH2P19823 946 aa28.68■■■□□ 2.18
CBX4-202ENST00000448310 EPHB2P29323 1055 aa28.68■■■□□ 2.18
CBX4-202ENST00000448310 CDCP2Q5VXM1 449 aa28.68■■■□□ 2.18
CBX4-202ENST00000448310 GDPD4Q6W3E5 623 aa28.68■■■□□ 2.18
CBX4-202ENST00000448310 RBM43Q6ZSC3 357 aaKnown RBP28.68■■■□□ 2.18
CBX4-202ENST00000448310 MON1BQ7L1V2 547 aa28.68■■■□□ 2.18
CBX4-202ENST00000448310 ZSCAN30Q86W11 494 aa28.68■■■□□ 2.18
CBX4-202ENST00000448310 RTL3Q8N8U3 475 aaKnown RBP28.68■■■□□ 2.18
CBX4-202ENST00000448310 FAM181AQ8N9Y4 354 aa28.68■■■□□ 2.18
CBX4-202ENST00000448310 FGF11Q92914 225 aa28.68■■■□□ 2.18
CBX4-202ENST00000448310 DUSP23Q9BVJ7 150 aa28.68■■■□□ 2.18
CBX4-202ENST00000448310 OSBPL1AQ9BXW6 950 aa28.68■■■□□ 2.18
CBX4-202ENST00000448310 LIMA1Q9UHB6 759 aaKnown RBP28.68■■■□□ 2.18
CBX4-202ENST00000448310 RAI2Q9Y5P3 530 aa28.68■■■□□ 2.18
CBX4-202ENST00000448310 SIGLEC16A6NMB1 481 aa28.67■■■□□ 2.18
CBX4-202ENST00000448310 LGALS16A8MUM7 142 aa28.67■■■□□ 2.18
CBX4-202ENST00000448310 RRP8O43159 456 aaKnown RBP28.67■■■□□ 2.18
CBX4-202ENST00000448310 CREB3O43889 395 aa28.67■■■□□ 2.18
CBX4-202ENST00000448310 JUNDP17535 347 aa28.67■■■□□ 2.18
CBX4-202ENST00000448310 PFN3P60673 137 aa28.67■■■□□ 2.18
CBX4-202ENST00000448310 EIF2B5Q13144 721 aaKnown RBP28.67■■■□□ 2.18
CBX4-202ENST00000448310 EFHC2Q5JST6 749 aa28.67■■■□□ 2.18
CBX4-202ENST00000448310 DNAJC24Q6P3W2 148 aa28.67■■■□□ 2.18
CBX4-202ENST00000448310 CLEC17AQ6ZS10 378 aa28.67■■■□□ 2.18
CBX4-202ENST00000448310 TTC7BQ86TV6 843 aa28.67■■■□□ 2.18
CBX4-202ENST00000448310 VPS36Q86VN1 386 aa28.67■■■□□ 2.18
CBX4-202ENST00000448310 DENND6BQ8NEG7 585 aa28.67■■■□□ 2.18
CBX4-202ENST00000448310 ASB12Q8WXK4 309 aa28.67■■■□□ 2.18
CBX4-202ENST00000448310 HMCESQ96FZ2 354 aa28.67■■■□□ 2.18
CBX4-202ENST00000448310 GDAP1L1Q96MZ0 367 aa28.67■■■□□ 2.18
CBX4-202ENST00000448310 MCEEQ96PE7 176 aa28.67■■■□□ 2.18
CBX4-202ENST00000448310 RP1P56715 2156 aa28.67■■■□□ 2.18
CBX4-202ENST00000448310 TCRBV5S1A1TA0A578 114 aa28.66■■■□□ 2.18
CBX4-202ENST00000448310 ZSCAN5CA6NGD5 496 aaPredicted RBP28.66■■■□□ 2.18
CBX4-202ENST00000448310 AREL1O15033 823 aa28.66■■■□□ 2.18
CBX4-202ENST00000448310 MMP20O60882 483 aa28.66■■■□□ 2.18
CBX4-202ENST00000448310 RHOAP61586 193 aa28.66■■■□□ 2.18
CBX4-202ENST00000448310 RPL7AP62424 266 aaKnown RBP28.66■■■□□ 2.18
CBX4-202ENST00000448310 UBXN1Q04323 297 aa28.66■■■□□ 2.18
CBX4-202ENST00000448310 DEFB133Q30KQ1 61 aa28.66■■■□□ 2.18
CBX4-202ENST00000448310 TBC1D25Q3MII6 688 aa28.66■■■□□ 2.18
CBX4-202ENST00000448310 RBFAQ8N0V3 343 aa28.66■■■□□ 2.18
CBX4-202ENST00000448310 IFI44Q8TCB0 444 aa28.66■■■□□ 2.18
CBX4-202ENST00000448310 LMX1AQ8TE12 382 aa28.66■■■□□ 2.18
CBX4-202ENST00000448310 BAP1Q92560 729 aa28.66■■■□□ 2.18
CBX4-202ENST00000448310 ARHGEF26Q96DR7 871 aa28.66■■■□□ 2.18
CBX4-202ENST00000448310 AGPAT1Q99943 283 aa28.66■■■□□ 2.18
CBX4-202ENST00000448310 TTYH3Q9C0H2 523 aa28.66■■■□□ 2.18
CBX4-202ENST00000448310 TCEAL2Q9H3H9 227 aaPredicted RBP28.66■■■□□ 2.18
CBX4-202ENST00000448310 COL27A1Q8IZC6 1860 aaPredicted RBP28.66■■■□□ 2.18
CBX4-202ENST00000448310 AQP9O43315 295 aa28.65■■■□□ 2.18
CBX4-202ENST00000448310 IGSF6O95976 241 aa28.65■■■□□ 2.18
CBX4-202ENST00000448310 ACTN2P35609 894 aa28.65■■■□□ 2.18
CBX4-202ENST00000448310 IGFALSP35858 605 aa28.65■■■□□ 2.18
CBX4-202ENST00000448310 DUSP3P51452 185 aaPredicted RBP28.65■■■□□ 2.18
CBX4-202ENST00000448310 ZNF143P52747 638 aaPredicted RBP28.65■■■□□ 2.18
CBX4-202ENST00000448310 CCDC173Q0VFZ6 552 aa28.65■■■□□ 2.18
CBX4-202ENST00000448310 CDKN3Q16667 212 aa28.65■■■□□ 2.18
CBX4-202ENST00000448310 ZCCHC8Q6NZY4 707 aaKnown RBP28.65■■■□□ 2.18
CBX4-202ENST00000448310 ANKRD20A12PQ8NF67 263 aa28.65■■■□□ 2.18
CBX4-202ENST00000448310 CENPTQ96BT3 561 aa28.65■■■□□ 2.18
CBX4-202ENST00000448310 EXOC2Q96KP1 924 aa28.65■■■□□ 2.18
CBX4-202ENST00000448310 DEPDC7Q96QD5 511 aa28.65■■■□□ 2.18
CBX4-202ENST00000448310 FZD10Q9ULW2 581 aa28.65■■■□□ 2.18
CBX4-202ENST00000448310 RASA4BC9J798 803 aa28.64■■■□□ 2.18
CBX4-202ENST00000448310 INSIG1O15503 277 aa28.64■■■□□ 2.18
CBX4-202ENST00000448310 RASA4O43374 803 aa28.64■■■□□ 2.18
CBX4-202ENST00000448310 CSO75390 466 aaKnown RBP28.64■■■□□ 2.18
CBX4-202ENST00000448310 MPOP05164 745 aa28.64■■■□□ 2.18
CBX4-202ENST00000448310 GP1BAP07359 652 aa28.64■■■□□ 2.18
CBX4-202ENST00000448310 MYL5Q02045 173 aa28.64■■■□□ 2.18
CBX4-202ENST00000448310 C1QBPQ07021 282 aaKnown RBP28.64■■■□□ 2.18
CBX4-202ENST00000448310 SASS6Q6UVJ0 657 aa28.64■■■□□ 2.18
CBX4-202ENST00000448310 MAPK15Q8TD08 544 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms