RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 NCEH1Q6PIU2 408 aa18.21■□□□□ 0.51
TRAPPC4-203ENST00000447216 PRPF39Q86UA1 669 aaKnown RBP18.21■□□□□ 0.51
TRAPPC4-203ENST00000447216 CACUL1Q86Y37 369 aa18.21■□□□□ 0.51
TRAPPC4-203ENST00000447216 PLPP6Q8IY26 295 aa18.21■□□□□ 0.51
TRAPPC4-203ENST00000447216 MMGT1Q8N4V1 131 aa18.21■□□□□ 0.51
TRAPPC4-203ENST00000447216 OR8D1Q8WZ84 308 aa18.21■□□□□ 0.51
TRAPPC4-203ENST00000447216 SLCO2A1Q92959 643 aa18.21■□□□□ 0.51
TRAPPC4-203ENST00000447216 VOPP1Q96AW1 172 aa18.21■□□□□ 0.51
TRAPPC4-203ENST00000447216 IMP4Q96G21 291 aaKnown RBP18.21■□□□□ 0.51
TRAPPC4-203ENST00000447216 OXNAD1Q96HP4 312 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC4-203ENST00000447216 HEPHQ9BQS7 1158 aa18.21■□□□□ 0.51
TRAPPC4-203ENST00000447216 SLC6A17Q9H1V8 727 aa18.21■□□□□ 0.51
TRAPPC4-203ENST00000447216 HAUS2Q9NVX0 235 aa18.21■□□□□ 0.51
TRAPPC4-203ENST00000447216 PAK5Q9P286 719 aa18.21■□□□□ 0.51
TRAPPC4-203ENST00000447216 WASF2Q9Y6W5 498 aa18.21■□□□□ 0.51
TRAPPC4-203ENST00000447216 MYLKQ15746 1914 aa18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 POP4O95707 220 aaKnown RBP18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 MT-CYBP00156 380 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 RPS9P46781 194 aaKnown RBP18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 AP1S1P61966 158 aa18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 SKOR1P84550 965 aa18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 GPS1Q13098 491 aa18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 PTK6Q13882 451 aa18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 DHX34Q14147 1143 aaKnown RBP18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 POM121L1PQ3SYA9 428 aa18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 ARSIQ5FYB1 569 aa18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 SYCP2LQ5T4T6 812 aa18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 CAMK1DQ8IU85 385 aa18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 FCRL5Q96RD9 977 aa18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 MLPHQ9BV36 600 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 COL25A1Q9BXS0 654 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 ETNK1Q9HBU6 452 aa18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 CD248Q9HCU0 757 aa18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 DLGAP2Q9P1A6 1054 aa18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 IL36AQ9UHA7 158 aa18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 ASIC3Q9UHC3 531 aa18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 SARDHQ9UL12 918 aa18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 FARP1Q9Y4F1 1045 aaPredicted RBP18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 NUMA1Q14980 2115 aa18.2■□□□□ 0.5
TRAPPC4-203ENST00000447216 TCRBV21S2A2A0A5A6 115 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 TNFRSF10AO00220 468 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 ATG13O75143 517 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 PMPCBO75439 489 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 LEFTY1O75610 366 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 UGT2B4P06133 528 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 AOC1P19801 751 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 PSMD8P48556 350 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 METAP1P53582 386 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 COPAP53621 1224 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 TRAF2Q12933 501 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 MTAPQ13126 283 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 ELAVL3Q14576 367 aaKnown RBP18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 CRY1Q16526 586 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 PARP6Q2NL67 630 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 SYT13Q7L8C5 426 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 MMAAQ8IVH4 418 aaKnown RBP18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 OR2T3Q8NH03 318 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 PBXIP1Q96AQ6 731 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 HINFPQ9BQA5 517 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 LRRC1Q9BTT6 524 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 TRIM31Q9BZY9 425 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 RAB6BQ9NRW1 208 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 PCDHGC4Q9Y5F7 938 aa18.19■□□□□ 0.5
TRAPPC4-203ENST00000447216 FAM187AA6NFU0 413 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 SERPINF2P08697 491 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 BASP1P80723 227 aaKnown RBP18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 SLC7A5Q01650 507 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 RAD51Q06609 339 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 BCL2L1Q07817 233 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 OLIG2Q13516 323 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 PCSK7Q16549 785 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 C8orf74Q6P047 294 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 KDELC1Q6UW63 502 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 KDELC2Q7Z4H8 507 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 MAATS1Q7Z4T9 603 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 SPEM1Q8N4L4 309 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 PIP4K2CQ8TBX8 421 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 TADA1Q96BN2 335 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 HHIPQ96QV1 700 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 MKRN2Q9H000 416 aaKnown RBP18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 RSPH9Q9H1X1 276 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 ATP13A3Q9H7F0 1226 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 FAM153AQ9UHL3 310 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 RAI2Q9Y5P3 530 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 EML5Q05BV3 1969 aa18.18■□□□□ 0.5
TRAPPC4-203ENST00000447216 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 FAM86C2PA6NEL3 165 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 PLK4O00444 970 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 KPNA3O00505 521 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 ALOX15BO15296 676 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 IL1BP01584 269 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 PRNPP04156 253 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 CES1P23141 567 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 FDFT1P37268 417 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 ADCY8P40145 1251 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 MAPK8P45983 427 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 GEMP55040 296 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 WNT3AP56704 352 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 RPS14P62263 151 aaKnown RBP18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 SATB1Q01826 763 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms