RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 TRAP1Q12931 704 aaKnown RBP19.3■□□□□ 0.68
SDCBP-204ENST00000447182 MAPRE2Q15555 327 aa19.3■□□□□ 0.68
SDCBP-204ENST00000447182 RAB41Q5JT25 222 aa19.3■□□□□ 0.68
SDCBP-204ENST00000447182 OTOP3Q7RTS5 596 aa19.3■□□□□ 0.68
SDCBP-204ENST00000447182 DENND6AQ8IWF6 608 aa19.3■□□□□ 0.68
SDCBP-204ENST00000447182 TXNDC5Q8NBS9 432 aaKnown RBP19.3■□□□□ 0.68
SDCBP-204ENST00000447182 PTCD2Q8WV60 388 aaKnown RBP19.3■□□□□ 0.68
SDCBP-204ENST00000447182 EME1Q96AY2 570 aa19.3■□□□□ 0.68
SDCBP-204ENST00000447182 RNF39Q9H2S5 420 aa19.3■□□□□ 0.68
SDCBP-204ENST00000447182 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.3■□□□□ 0.68
SDCBP-204ENST00000447182 AP4S1Q9Y587 144 aa19.3■□□□□ 0.68
SDCBP-204ENST00000447182 TRIM24O15164 1050 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 LRIG2O94898 1065 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 ATP5F1P24539 256 aaPredicted RBP19.29■□□□□ 0.68
SDCBP-204ENST00000447182 ARNTP27540 789 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 LRPAP1P30533 357 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 CXCR3P49682 368 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 MPP1Q00013 466 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 CTBP1Q13363 440 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 LRP8Q14114 963 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 ZNF460Q14592 562 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 DGKDQ16760 1214 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 KIAA0319Q5VV43 1072 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 PM20D1Q6GTS8 502 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 GK5Q6ZS86 529 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 TRIM67Q6ZTA4 783 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 SPPL2BQ8TCT7 592 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 IRGQQ8WZA9 623 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 ATP6V1E2Q96A05 226 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 TBL1YQ9BQ87 522 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 TIMMDC1Q9NPL8 285 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 ADA2Q9NZK5 511 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 HSFX1Q9UBD0 423 aa19.29■□□□□ 0.68
SDCBP-204ENST00000447182 PIN4Q9Y237 131 aaKnown RBP19.29■□□□□ 0.68
SDCBP-204ENST00000447182 CCDC78A2IDD5 438 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 CCDC160A6NGH7 325 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 KCNU1A8MYU2 1149 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 TCN1P20061 433 aaPredicted RBP19.28■□□□□ 0.68
SDCBP-204ENST00000447182 ATXN3P54252 364 aaPredicted RBP19.28■□□□□ 0.68
SDCBP-204ENST00000447182 SQLEQ14534 574 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 PSMD5Q16401 504 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 WSCD1Q658N2 575 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 DCLRE1AQ6PJP8 1040 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 ISLR2Q6UXK2 745 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 SULF1Q8IWU6 871 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 FAM156AQ8NDB6 213 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 RIN3Q8TB24 985 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 OMDQ99983 421 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 OSBPL11Q9BXB4 747 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 FTHL17Q9BXU8 183 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 WDCPQ9H6R7 721 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 SUDS3Q9H7L9 328 aaPredicted RBP19.28■□□□□ 0.68
SDCBP-204ENST00000447182 MEAF6Q9HAF1 191 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 CACNA2D2Q9NY47 1150 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 SMIM35A0A1B0GVV1 85 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 ZBTB7AO95365 584 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 SULT2A1Q06520 285 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 UBXN11Q5T124 520 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 DENND5AQ6IQ26 1287 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 CNSTQ6PJW8 725 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 POTEHQ6S545 545 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 ZNF467Q7Z7K2 595 aaPredicted RBP19.28■□□□□ 0.68
SDCBP-204ENST00000447182 C2CD4AQ8NCU7 369 aaPredicted RBP19.28■□□□□ 0.68
SDCBP-204ENST00000447182 HMGCLL1Q8TB92 370 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 DCPSQ96C86 337 aaKnown RBP19.28■□□□□ 0.68
SDCBP-204ENST00000447182 FCRL5Q96RD9 977 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 UHRF1Q96T88 793 aaPredicted RBP19.28■□□□□ 0.68
SDCBP-204ENST00000447182 SMOQ99835 787 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 HAUS8Q9BT25 410 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 TKTL2Q9H0I9 626 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 POMKQ9H5K3 350 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 CRTAC1Q9NQ79 661 aa19.28■□□□□ 0.68
SDCBP-204ENST00000447182 C7orf72A4D263 438 aa19.27■□□□□ 0.68
SDCBP-204ENST00000447182 E7ENX8 843 aa19.27■□□□□ 0.68
SDCBP-204ENST00000447182 ANXA9O76027 345 aa19.27■□□□□ 0.68
SDCBP-204ENST00000447182 SNAI1O95863 264 aaPredicted RBP19.27■□□□□ 0.68
SDCBP-204ENST00000447182 CCNCP24863 283 aa19.27■□□□□ 0.68
SDCBP-204ENST00000447182 TAS2R39P59534 338 aa19.27■□□□□ 0.68
SDCBP-204ENST00000447182 POU4F1Q01851 419 aa19.27■□□□□ 0.68
SDCBP-204ENST00000447182 IKBKEQ14164 716 aa19.27■□□□□ 0.68
SDCBP-204ENST00000447182 DUSP28Q4G0W2 176 aa19.27■□□□□ 0.68
SDCBP-204ENST00000447182 IRAK1BP1Q5VVH5 260 aa19.27■□□□□ 0.68
SDCBP-204ENST00000447182 ESRP1Q6NXG1 681 aaKnown RBP19.27■□□□□ 0.68
SDCBP-204ENST00000447182 GPRIN1Q7Z2K8 1008 aa19.27■□□□□ 0.68
SDCBP-204ENST00000447182 PPHLN1Q8NEY8 458 aaKnown RBP19.27■□□□□ 0.68
SDCBP-204ENST00000447182 HEXDCQ8WVB3 486 aa19.27■□□□□ 0.68
SDCBP-204ENST00000447182 OSBPL2Q9H1P3 480 aa19.27■□□□□ 0.68
SDCBP-204ENST00000447182 RNF11Q9Y3C5 154 aa19.27■□□□□ 0.68
SDCBP-204ENST00000447182 TCAF1Q9Y4C2 921 aa19.27■□□□□ 0.68
SDCBP-204ENST00000447182 MYOCOSA0A1B0GUC4 107 aa19.27■□□□□ 0.67
SDCBP-204ENST00000447182 TCRBV3S1A0A5B6 114 aa19.27■□□□□ 0.67
SDCBP-204ENST00000447182 USP17L7P0C7H9 530 aa19.27■□□□□ 0.67
SDCBP-204ENST00000447182 SMPD1P17405 629 aa19.27■□□□□ 0.67
SDCBP-204ENST00000447182 SLC1A2P43004 574 aa19.27■□□□□ 0.67
SDCBP-204ENST00000447182 CD151P48509 253 aa19.27■□□□□ 0.67
SDCBP-204ENST00000447182 INHBCP55103 352 aa19.27■□□□□ 0.67
SDCBP-204ENST00000447182 PDAP1Q13442 181 aaKnown RBP19.27■□□□□ 0.67
SDCBP-204ENST00000447182 POU6F1Q14863 301 aa19.27■□□□□ 0.67
SDCBP-204ENST00000447182 CARM1Q86X55 608 aa19.27■□□□□ 0.67
SDCBP-204ENST00000447182 AFAP1L2Q8N4X5 818 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms