RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 P4HA1P13674 534 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 UGT1A6P19224 532 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 UGT1A1P22309 533 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 UGT1A4P22310 534 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 UGT1A3P35503 534 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 UGT1A5P35504 534 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 ACADSBP45954 432 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 KRT6CP48668 564 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 FMO5P49326 533 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 VAMP7P51809 220 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 ENPEPQ07075 957 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 ELAVL2Q12926 359 aaKnown RBP13.25□□□□□ -0.29
DDX56-206ENST00000446987 DUOXA2Q1HG44 320 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 TRIM16LQ309B1 348 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 ZACNQ401N2 412 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 SH2D5Q6ZV89 423 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 LIMS2Q7Z4I7 341 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 CRLF3Q8IUI8 442 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 LRRC52Q8N7C0 313 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 SLC22A17Q8WUG5 538 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 DCAKDQ8WVC6 231 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 ELMO3Q96BJ8 720 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 SENP8Q96LD8 212 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 ZNF597Q96LX8 424 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 CLSTN3Q9BQT9 956 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 C1orf50Q9BV19 199 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 UGT1A7Q9HAW7 530 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 UGT1A10Q9HAW8 530 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 UGT1A8Q9HAW9 530 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 RIC8BQ9NVN3 520 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 SIRPGQ9P1W8 387 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 MTRRQ9UBK8 725 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 PCDHB8Q9UN66 801 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 TIMM13Q9Y5L4 95 aaPredicted RBP13.25□□□□□ -0.29
DDX56-206ENST00000446987 SYN3O14994 580 aa13.24□□□□□ -0.29
DDX56-206ENST00000446987 SNNO75324 88 aaPredicted RBP13.24□□□□□ -0.29
DDX56-206ENST00000446987 TNNI1P19237 187 aa13.24□□□□□ -0.29
DDX56-206ENST00000446987 TAF6P49848 677 aa13.24□□□□□ -0.29
DDX56-206ENST00000446987 SUZ12Q15022 739 aaKnown RBP13.24□□□□□ -0.29
DDX56-206ENST00000446987 PSMD5Q16401 504 aa13.24□□□□□ -0.29
DDX56-206ENST00000446987 PUS10Q3MIT2 529 aaKnown RBP13.24□□□□□ -0.29
DDX56-206ENST00000446987 VARS2Q5ST30 1063 aaKnown RBP13.24□□□□□ -0.29
DDX56-206ENST00000446987 SLX4IPQ5VYV7 408 aa13.24□□□□□ -0.29
DDX56-206ENST00000446987 PCGF5Q86SE9 256 aa13.24□□□□□ -0.29
DDX56-206ENST00000446987 TTC30AQ86WT1 665 aa13.24□□□□□ -0.29
DDX56-206ENST00000446987 EFHBQ8N7U6 833 aa13.24□□□□□ -0.29
DDX56-206ENST00000446987 TAMM41Q96BW9 452 aa13.24□□□□□ -0.29
DDX56-206ENST00000446987 SERPINI1Q99574 410 aa13.24□□□□□ -0.29
DDX56-206ENST00000446987 RTP3Q9BQQ7 232 aa13.24□□□□□ -0.29
DDX56-206ENST00000446987 NUP85Q9BW27 656 aa13.24□□□□□ -0.29
DDX56-206ENST00000446987 INTS2Q9H0H0 1204 aaKnown RBP13.24□□□□□ -0.29
DDX56-206ENST00000446987 ARMC7Q9H6L4 198 aa13.24□□□□□ -0.29
DDX56-206ENST00000446987 LIN28AQ9H9Z2 209 aaKnown RBP13.24□□□□□ -0.29
DDX56-206ENST00000446987 MRPL17Q9NRX2 175 aaKnown RBP13.24□□□□□ -0.29
DDX56-206ENST00000446987 ANKMY1Q9P2S6 941 aa13.24□□□□□ -0.29
DDX56-206ENST00000446987 HCFC2Q9Y5Z7 792 aa13.24□□□□□ -0.29
DDX56-206ENST00000446987 IKBKGQ9Y6K9 419 aa13.24□□□□□ -0.29
DDX56-206ENST00000446987 TNNC2P02585 160 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 CYP11A1P05108 521 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 CHRNB1P11230 501 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 L1CAMP32004 1257 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 GNL1P36915 607 aaPredicted RBP13.23□□□□□ -0.29
DDX56-206ENST00000446987 CLCN4P51793 760 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 SLC25A3Q00325 362 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 GRSF1Q12849 480 aaKnown RBP eCLIP13.23□□□□□ -0.29
DDX56-206ENST00000446987 ADAM15Q13444 863 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 TRPC3Q13507 836 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 ACAP1Q15027 740 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 SIGIRRQ6IA17 410 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 PPP4R4Q6NUP7 873 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 SV2AQ7L0J3 742 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 ANKRD13BQ86YJ7 626 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 ELMOD1Q8N336 334 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 TMIGD2Q96BF3 282 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 RMND5BQ96G75 393 aaPredicted RBP13.23□□□□□ -0.29
DDX56-206ENST00000446987 PAFAH2Q99487 392 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 CEP44Q9C0F1 390 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 RPF2Q9H7B2 306 aaKnown RBP13.23□□□□□ -0.29
DDX56-206ENST00000446987 SEPT11Q9NVA2 429 aaKnown RBP13.23□□□□□ -0.29
DDX56-206ENST00000446987 CLEC1BQ9P126 229 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 FNIP2Q9P278 1114 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 PCDHGB4Q9UN71 923 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 RABL2BQ9UNT1 228 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 RNF11Q9Y3C5 154 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 PCDHGB5Q9Y5G0 923 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 HEMK1Q9Y5R4 338 aaPredicted RBP13.23□□□□□ -0.29
DDX56-206ENST00000446987 VCANP13611 3396 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 DENND4AQ7Z401 1863 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 KPNA7A9QM74 516 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 GCATO75600 419 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 KRT75O95678 551 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 EPCAMP16422 314 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 GCLMP48507 274 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 BMXP51813 675 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 CSE1LP55060 971 aaKnown RBP13.23□□□□□ -0.29
DDX56-206ENST00000446987 MYL6P60660 151 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 GALNT2Q10471 571 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 CBWD6Q4V339 395 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 TEX44Q53QW1 395 aa13.23□□□□□ -0.29
DDX56-206ENST00000446987 CBWD3Q5JTY5 395 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms