RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 TRPS1Q9UHF7 1281 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 INHAP05111 366 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 CDH4P55283 916 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 DPYSL3Q14195 570 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 CRYMQ14894 314 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 TIGD5Q53EQ6 642 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 SCUBE1Q8IWY4 988 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 TTC29Q8NA56 475 aaPredicted RBP8.62□□□□□ -1.03
PTPN3-204ENST00000446349 SALL3Q9BXA9 1300 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 A0A1B0GVM2 712 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 TCAF2A6NFQ2 919 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 SERPINB7O75635 380 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 KRT33AO76009 404 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 ZNF23P17027 643 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 IDSP22304 550 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 STX4Q12846 297 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 ZC3H12AQ5D1E8 599 aaKnown RBP8.62□□□□□ -1.03
PTPN3-204ENST00000446349 PRAMEF19Q5SWL8 479 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 TPRKBQ9Y3C4 175 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 ZNF682O95780 498 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 RHOQP17081 205 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 CD86P42081 329 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 ASMTP46597 345 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 RASA2Q15283 850 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 WDR59Q6PJI9 974 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 NEK10Q6ZWH5 1172 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 PIWIL4Q7Z3Z4 852 aaKnown RBP8.62□□□□□ -1.03
PTPN3-204ENST00000446349 TMC8Q8IU68 726 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 CYP2W1Q8TAV3 490 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 FNIP1Q8TF40 1166 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 DNAJC16Q9Y2G8 782 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 TBC1D3DA0A087WVF3 549 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 TBC1D3IA0A087WXS9 549 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 TBC1D3EA0A087X179 549 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 TBC1D3KA0A087X1G2 549 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 C1orf232A0A0U1RR37 186 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 TBC1D3FA6NER0 549 aaPredicted RBP8.62□□□□□ -1.03
PTPN3-204ENST00000446349 TBC1D3LB9A6J9 549 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 MGRN1O60291 552 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 POP4O95707 220 aaKnown RBP8.62□□□□□ -1.03
PTPN3-204ENST00000446349 TBC1D3HP0C7X1 549 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 ARF4P18085 180 aaPredicted RBP8.62□□□□□ -1.03
PTPN3-204ENST00000446349 NDUFS1P28331 727 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 AGKQ53H12 422 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 TMEM164Q5U3C3 297 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 TBC1D3GQ6DHY5 549 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 TBC1D3CQ6IPX1 549 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 TBC1D3Q8IZP1 549 aaPredicted RBP8.62□□□□□ -1.03
PTPN3-204ENST00000446349 TBCDQ9BTW9 1192 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 CYP4F12Q9HCS2 524 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 DUS2Q9NX74 493 aaKnown RBP8.62□□□□□ -1.03
PTPN3-204ENST00000446349 HEY2Q9UBP5 337 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 PADI3Q9ULW8 664 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 VPS4AQ9UN37 437 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 SLC9A8Q9Y2E8 581 aa8.62□□□□□ -1.03
PTPN3-204ENST00000446349 NCANO14594 1321 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 F8VP50 259 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 LBPP18428 481 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 ATP5F1P24539 256 aaPredicted RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 FAM183BPQ6ZVS7 135 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 HSD17B14Q9BPX1 270 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 CDH19Q9H159 772 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 CLDN4O14493 209 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 SERPINI2O75830 405 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 CD44P16070 742 aaKnown RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 IGFALSP35858 605 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 NDST2P52849 883 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 DSG1Q02413 1049 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 TOMM20Q15388 145 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 PACS1Q6VY07 963 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 ARCQ7LC44 396 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 CTU1Q7Z7A3 348 aaKnown RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 ETNPPLQ8TBG4 499 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 GRIN3AQ8TCU5 1115 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 MYO19Q96H55 970 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 DCLRE1BQ9H816 532 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 MTRRQ9UBK8 725 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 HMGXB4Q9UGU5 601 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 SNHG28P0DPA3 235 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 ELK3P41970 407 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 DRG2P55039 364 aaKnown RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 FASTKQ14296 549 aaKnown RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 LCLAT1Q6UWP7 414 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 GET4Q7L5D6 327 aaPredicted RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 EPS8L1Q8TE68 723 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 ATXN2LQ8WWM7 1075 aaKnown RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 KAT2BQ92831 832 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 ZMAT2Q96NC0 199 aaKnown RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 FERD3LQ96RJ6 166 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 SMURF2Q9HAU4 748 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 TMBIM4Q9HC24 238 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 CLIC5Q9NZA1 410 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 PDP2Q9P2J9 529 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 IPO13O94829 963 aaKnown RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 SLC25A14O95258 325 aaPredicted RBP8.61□□□□□ -1.03
PTPN3-204ENST00000446349 FMO4P31512 558 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 MAMLD1Q13495 774 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 FAM220AQ7Z4H9 259 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 STYXQ8WUJ0 223 aa8.61□□□□□ -1.03
PTPN3-204ENST00000446349 CRELD1Q96HD1 420 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms