RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 KIF1CO43896 1103 aaKnown RBP4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 SH3BP5O60239 455 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 WDHD1O75717 1129 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 GALTP07902 379 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 MYZAPP0CAP1 466 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 PSG1P11464 419 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 ENO3P13929 434 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 EDN2P20800 178 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 EPHA8P29322 1005 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 RFC1P35251 1148 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 DDIT3P35638 169 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 AVPR1AP37288 418 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 RFX5P48382 616 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 POLD2P49005 469 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 CXCR3P49682 368 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 TRAF1Q13077 416 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 DDX10Q13206 875 aaKnown RBP4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 HEPHL1Q6MZM0 1159 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 INO80CQ6PI98 192 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 COLCA1Q6ZS62 124 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 R3HCC1LQ7Z5L2 792 aaKnown RBP4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 CTU1Q7Z7A3 348 aaKnown RBP4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 CAMK1DQ8IU85 385 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 RBFAQ8N0V3 343 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 TEX45Q8NA69 505 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 NFKBIDQ8NI38 313 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 GABPB2Q8TAK5 448 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 BICD2Q8TD16 824 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 NR1H4Q96RI1 486 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 BABAM1Q9NWV8 329 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 KCND2Q9NZV8 630 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 SARDHQ9UL12 918 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 CAMK2AQ9UQM7 478 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 TNFRSF18Q9Y5U5 241 aa4.77□□□□□ -1.65
HMGB3P6-201ENST00000444896 I6L893 689 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 EBAG9O00559 213 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 TBX18O95935 607 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 HOXB2P14652 356 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 KRT9P35527 623 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 GPR12P47775 334 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 CLDN2P57739 230 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 PRTGQ2VWP7 1150 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 SERTAD4-AS1Q5TG53 156 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 ATG9BQ674R7 924 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 TRAPPC11Q7Z392 1133 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 TMEM199Q8N511 208 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 C11orf65Q8NCR3 313 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 KLHL15Q96M94 604 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 NLRP4Q96MN2 994 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 FCRL4Q96PJ5 515 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 YME1L1Q96TA2 773 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 NPFFR1Q9GZQ6 430 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 LHPPQ9H008 270 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 VEZTQ9HBM0 779 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 C20orf141Q9NUB4 165 aa4.76□□□□□ -1.65
HMGB3P6-201ENST00000444896 CC2D2AQ9P2K1 1620 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 PRXQ9BXM0 1461 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 TEX13CA0A0J9YWL9 993 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 BECN2A8MW95 431 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 H0YGN5 161 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 TGFB1I1O43294 461 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 MBD4O95243 580 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 HEXAP06865 529 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 UBL4AP11441 157 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 SLC2A4P14672 509 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 PTPN2P17706 415 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 SRD5A1P18405 259 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 SCP2P22307 547 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 TBXAS1P24557 533 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 FMO4P31512 558 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 DCTDP32321 178 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 CDH12P55289 794 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 YWHAZP63104 245 aaKnown RBP4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 TAF11Q15544 211 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 TSTQ16762 297 aaKnown RBP4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 PLEKHO1Q53GL0 409 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 DCAF12L2Q5VW00 463 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 GPAT4Q86UL3 456 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 PIM3Q86V86 326 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 LPAR1Q92633 364 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 KIF1BPQ96EK5 621 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 HMCESQ96FZ2 354 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 CAMK1GQ96NX5 476 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 MSTO1Q9BUK6 570 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 PCDHB16Q9NRJ7 776 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 CTNNAL1Q9UBT7 734 aa4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGB3P6-201ENST00000444896 A0A1W2PPH5 198 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 KLRF2D3W0D1 207 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 TAF4O00268 1085 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 LDB2O43679 373 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 RTN3O95197 1032 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 TOMM40O96008 361 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 MMP3P08254 477 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 ARSBP15848 533 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 GNLYP22749 145 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 RGS2P41220 211 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 HARS2P49590 506 aaKnown RBP4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 P2RX3P56373 397 aa4.74□□□□□ -1.65
HMGB3P6-201ENST00000444896 PPATQ06203 517 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms