RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 SHROOM3Q8TF72 1996 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 C16orf96A6NNT2 1141 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 PRR5-ARHGAP8B1AHC4 643 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 PATE3B3GLJ2 98 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 RNF103O00237 685 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 ZRANB2O95218 330 aaKnown RBP eCLIP17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 MAP3K6O95382 1288 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 ADRB3P13945 408 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 CD27P26842 260 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 MAPK8P45983 427 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 DYNLT1P63172 113 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 ARHGAP8P85298 464 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 GBE1Q04446 702 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 NSUN2Q08J23 767 aaKnown RBP eCLIP17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 TFDP2Q14188 446 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 MARC1Q5VT66 337 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 SLC9A4Q6AI14 798 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 SLC23A3Q6PIS1 610 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 SPOCD1Q6ZMY3 1216 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 PARS2Q7L3T8 475 aaKnown RBP17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 SRLQ86TD4 932 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 RCOR2Q8IZ40 523 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 ZCCHC9Q8N567 271 aaKnown RBP17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 PLD5Q8N7P1 536 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 CCNYQ8ND76 341 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 PSKH2Q96QS6 385 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 TUBGCP5Q96RT8 1024 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 DTLQ9NZJ0 730 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 TRIM10Q9UDY6 481 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 SLC6A14Q9UN76 642 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 HEY1Q9Y5J3 304 aa17.68■□□□□ 0.42
SMARCAL1-209ENST00000444508 A0A1B0GTW7 788 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 CCDC66A2RUB6 948 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 GRID2IPA4D2P6 1211 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 BCAT2O15382 392 aaPredicted RBP17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 INSIG1O15503 277 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 KRT86O43790 486 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 PEX11BO96011 259 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 IGHV4-34P06331 123 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 SERPINF2P08697 491 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 CCNCP24863 283 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 CTNNA1P35221 906 aaKnown RBP17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 PI4KAP42356 2102 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 CDKN2BP42772 138 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 MMP13P45452 471 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 MARCKSL1P49006 195 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 SCNN1BP51168 640 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 AP1S1P61966 158 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 TFDP3Q5H9I0 405 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 CFAP58Q5T655 872 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 RNF10Q8N5U6 811 aaKnown RBP17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 PAF1Q8N7H5 531 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 LRRC57Q8N9N7 239 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 EXD1Q8NHP7 514 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 KRT35Q92764 455 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 RAB7BQ96AH8 199 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 TSGA13Q96PP4 275 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 ATP13A3Q9H7F0 1226 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 HAUS2Q9NVX0 235 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 AMFRQ9UKV5 643 aa17.67■□□□□ 0.42
SMARCAL1-209ENST00000444508 CFAP54Q96N23 3096 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 A0A0U1RQJ8 604 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 A0A1W2PPC4 97 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 MATN3O15232 486 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 RNGTTO60942 597 aaKnown RBP17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 NEBLO76041 1014 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 PCDH8O95206 1070 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 PIGNO95427 931 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 CCDC175P0C221 793 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 XPAP23025 273 aaPredicted RBP17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 SERPINA4P29622 427 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 NUDT1P36639 197 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 RGRP47804 291 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 TAS2R38P59533 333 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 PPP2CBP62714 309 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 PPP2CAP67775 309 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 IRX4P78413 519 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 SLC10A2Q12908 348 aaPredicted RBP17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 HNRNPDQ14103 355 aaKnown RBP17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 TAZQ16635 292 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 KAZNQ674X7 775 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 NEK5Q6P3R8 708 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 BZW1Q7L1Q6 419 aaKnown RBP17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 PEX26Q7Z412 305 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 PRPF39Q86UA1 669 aaKnown RBP17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 TRIM69Q86WT6 500 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 HCAR2Q8TDS4 363 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 FATE1Q969F0 183 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 ZNF641Q96N77 438 aaPredicted RBP17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 DKK3Q9UBP4 350 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 PCDHA3Q9Y5H8 950 aa17.66■□□□□ 0.42
SMARCAL1-209ENST00000444508 CEP250Q9BV73 2442 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 LNP1A1A4G5 178 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 NEMP1O14524 444 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 PPP1R12AO14974 1030 aaPredicted RBP17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 MUSKO15146 869 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 AP1G1O43747 822 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 CST8O60676 142 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 KRT10P13645 584 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms