RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 AP3B1O00203 1094 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 NCAM2O15394 837 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 SYNCRIPO60506 623 aaKnown RBP10.71□□□□□ -0.69
TOP3B-210ENST00000444502 HNRNPCL1O60812 293 aaKnown RBP10.71□□□□□ -0.69
TOP3B-210ENST00000444502 ITGBL1O95965 494 aaPredicted RBP10.71□□□□□ -0.69
TOP3B-210ENST00000444502 GNRH1P01148 92 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 HIST1H2AGP0C0S8 130 aaPredicted RBP10.71□□□□□ -0.69
TOP3B-210ENST00000444502 HIST1H2ADP20671 130 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 CDH5P33151 784 aaPredicted RBP10.71□□□□□ -0.69
TOP3B-210ENST00000444502 SERPINB8P50452 374 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 PPIDQ08752 370 aaKnown RBP10.71□□□□□ -0.69
TOP3B-210ENST00000444502 CYTH1Q15438 398 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 FAM187BQ17R55 369 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 PPM1JQ5JR12 505 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 UTS2BQ765I0 119 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 CIR1Q86X95 450 aaPredicted RBP10.71□□□□□ -0.69
TOP3B-210ENST00000444502 TRIML2Q8N7C3 387 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 SLC35F5Q8WV83 523 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 HIST1H2AHQ96KK5 128 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 HIST1H2AJQ99878 128 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 H2AFJQ9BTM1 129 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 BBS2Q9BXC9 721 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 SLC4A5Q9BY07 1137 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 FAM96AQ9H5X1 160 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 CAB39LQ9H9S4 337 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 BCAP29Q9UHQ4 241 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 PCDHA11Q9Y5I1 949 aa10.71□□□□□ -0.69
TOP3B-210ENST00000444502 TRAV19A0A0A6YYK7 116 aa10.71□□□□□ -0.7
TOP3B-210ENST00000444502 BCLAF3A2AJT9 711 aaKnown RBP10.71□□□□□ -0.7
TOP3B-210ENST00000444502 ZBTB42B2RXF5 422 aa10.71□□□□□ -0.7
TOP3B-210ENST00000444502 SUPT3HB4E1H0 165 aa10.71□□□□□ -0.7
TOP3B-210ENST00000444502 SRP72O76094 671 aaKnown RBP10.71□□□□□ -0.7
TOP3B-210ENST00000444502 ESRRBO95718 433 aa10.71□□□□□ -0.7
TOP3B-210ENST00000444502 AP2B1P63010 937 aa10.71□□□□□ -0.7
TOP3B-210ENST00000444502 OLIG2Q13516 323 aa10.71□□□□□ -0.7
TOP3B-210ENST00000444502 DCTN2Q13561 401 aaKnown RBP10.71□□□□□ -0.7
TOP3B-210ENST00000444502 RBBP7Q16576 425 aa10.71□□□□□ -0.7
TOP3B-210ENST00000444502 CALML6Q8TD86 181 aa10.71□□□□□ -0.7
TOP3B-210ENST00000444502 HSPBAP1Q96EW2 488 aa10.71□□□□□ -0.7
TOP3B-210ENST00000444502 CERS2Q96G23 380 aa10.71□□□□□ -0.7
TOP3B-210ENST00000444502 TUBGCP5Q96RT8 1024 aa10.71□□□□□ -0.7
TOP3B-210ENST00000444502 EOMESO95936 686 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 CD86P42081 329 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 CDH17Q12864 832 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 ATP1A4Q13733 1029 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 GTF2H3Q13889 308 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 CSHL1Q14406 222 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 GPR158Q5T848 1215 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 MRNIPQ6NTE8 343 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 IYDQ6PHW0 289 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 LAYNQ6UX15 382 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 SPATA6LQ8N4H0 392 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 ARFGAP1Q8N6T3 406 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 SMG7Q92540 1137 aaKnown RBP10.7□□□□□ -0.7
TOP3B-210ENST00000444502 CDK5RAP1Q96SZ6 601 aaKnown RBP10.7□□□□□ -0.7
TOP3B-210ENST00000444502 ZNF395Q9H8N7 513 aaPredicted RBP10.7□□□□□ -0.7
TOP3B-210ENST00000444502 CD274Q9NZQ7 290 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 SUN2Q9UH99 717 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 PACSIN3Q9UKS6 424 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 CHKBQ9Y259 395 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 KLHL2O95198 593 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 FAM163BP0C2L3 166 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 MAP4P27816 1152 aaKnown RBP10.7□□□□□ -0.7
TOP3B-210ENST00000444502 PTPN9P43378 593 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 PLK1P53350 603 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 IL1RL1Q01638 556 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 PPIGQ13427 754 aaKnown RBP eCLIP10.7□□□□□ -0.73e-7■■□□□ 13.9
TOP3B-210ENST00000444502 CCDC157Q569K6 752 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 RD3Q7Z3Z2 195 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 OSTM1Q86WC4 334 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 LZICQ8WZA0 190 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 SERPINI1Q99574 410 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 ACBD6Q9BR61 282 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 ILKAPQ9H0C8 392 aaPredicted RBP10.7□□□□□ -0.7
TOP3B-210ENST00000444502 OSGEPL1Q9H4B0 414 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 MAN1C1Q9NR34 630 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 ARL8BQ9NVJ2 186 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 THAP1Q9NVV9 213 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 TIMM44O43615 452 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 DAB1O75553 588 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 TCEA3O75764 348 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 PROZP22891 400 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 NEK3P51956 506 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 DDX39BQ13838 428 aaKnown RBP10.7□□□□□ -0.7
TOP3B-210ENST00000444502 DNAL1Q4LDG9 190 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 ZNF470Q6ECI4 717 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 PACS1Q6VY07 963 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 SATL1Q86VE3 508 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 SERINC5Q86VE9 423 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 TDRPQ86YL5 185 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 PQLC3Q8N755 202 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 ARL14EPQ8N8R7 260 aaPredicted RBP10.7□□□□□ -0.7
TOP3B-210ENST00000444502 AZIN2Q96A70 460 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 ZNF333Q96JL9 665 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 SEMA3CQ99985 751 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 BTBD10Q9BSF8 475 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 CFAP97Q9P2B7 532 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 WDR37Q9Y2I8 494 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 ACOT9Q9Y305 439 aa10.7□□□□□ -0.7
TOP3B-210ENST00000444502 KDM1AO60341 852 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms