RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 LRRC38Q5VT99 294 aa15.33■□□□□ 0.05
CHFR-204ENST00000443047 EPGNQ6UW88 154 aa15.33■□□□□ 0.05
CHFR-204ENST00000443047 SCUBE3Q8IX30 993 aa15.33■□□□□ 0.05
CHFR-204ENST00000443047 HACE1Q8IYU2 909 aa15.33■□□□□ 0.05
CHFR-204ENST00000443047 CLIP4Q8N3C7 705 aa15.33■□□□□ 0.05
CHFR-204ENST00000443047 FAM110BQ8TC76 370 aa15.33■□□□□ 0.05
CHFR-204ENST00000443047 RXFP2Q8WXD0 754 aa15.33■□□□□ 0.05
CHFR-204ENST00000443047 APBA2Q99767 749 aa15.33■□□□□ 0.05
CHFR-204ENST00000443047 KATNBL1Q9H079 304 aa15.33■□□□□ 0.05
CHFR-204ENST00000443047 LHX5Q9H2C1 402 aa15.33■□□□□ 0.05
CHFR-204ENST00000443047 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.33■□□□□ 0.05
CHFR-204ENST00000443047 PCDHGA3Q9Y5H0 932 aa15.33■□□□□ 0.05
CHFR-204ENST00000443047 ANKRD34BA5PLL1 514 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 SLC15A5A6NIM6 579 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 ACOT8O14734 319 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 ALDOAP04075 364 aaKnown RBP15.33■□□□□ 0.04
CHFR-204ENST00000443047 GRK2P25098 689 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 TYK2P29597 1187 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 MAPK11Q15759 364 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 LSM12Q3MHD2 195 aaKnown RBP15.33■□□□□ 0.04
CHFR-204ENST00000443047 FAM47CQ5HY64 1035 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 LDLRAD1Q5T700 205 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 PMF1Q6P1K2 205 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 USP50Q70EL3 339 aaPredicted RBP15.33■□□□□ 0.04
CHFR-204ENST00000443047 CAND1Q86VP6 1230 aaKnown RBP15.33■□□□□ 0.04
CHFR-204ENST00000443047 C7orf31Q8N865 590 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 NIPA2Q8N8Q9 360 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 UPF1Q92900 1129 aaKnown RBP eCLIP15.33■□□□□ 0.041e-7■■■□□ 15.9
CHFR-204ENST00000443047 DPEP3Q9H4B8 488 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 FAM96AQ9H5X1 160 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 POLE4Q9NR33 117 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 COPG2Q9UBF2 871 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 AURKCQ9UQB9 309 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 DOCK3Q8IZD9 2030 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 TOR1BO14657 336 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 DYNC1LI2O43237 492 aaPredicted RBP15.33■□□□□ 0.04
CHFR-204ENST00000443047 PFKMP08237 780 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 PDGFRAP16234 1089 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 PRKCHP24723 683 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 ATXN1P54253 815 aaKnown RBP15.33■□□□□ 0.04
CHFR-204ENST00000443047 CDH6P55285 790 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 DPYSQ14117 519 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 PLCL1Q15111 1095 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 GOLGA7BQ2TAP0 167 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 CHSY3Q70JA7 882 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 DSG4Q86SJ6 1040 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 KIAA2013Q8IYS2 634 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 PGAM4Q8N0Y7 254 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 CBR4Q8N4T8 237 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 NAT16Q8N8M0 369 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 OR6J1Q8NGC5 347 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 NPLOC4Q8TAT6 608 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 FBXL20Q96IG2 436 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 MS4A4AQ96JQ5 239 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 ANKRD60Q9BZ19 345 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 EFCAB1Q9HAE3 211 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 SMOXQ9NWM0 555 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 ERVK-11Q9UQG0 969 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 CDY2AQ9Y6F7 541 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 CDY1Q9Y6F8 540 aa15.33■□□□□ 0.04
CHFR-204ENST00000443047 TRDMT1O14717 391 aaKnown RBP15.32■□□□□ 0.04
CHFR-204ENST00000443047 GLRA3O75311 464 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 MATN1P21941 496 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 NR4A2P43354 598 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 TUFMP49411 452 aaKnown RBP15.32■□□□□ 0.04
CHFR-204ENST00000443047 RAD23AP54725 363 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 HADHQ16836 314 aaKnown RBP15.32■□□□□ 0.04
CHFR-204ENST00000443047 PPP2R2DQ66LE6 453 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 NAPRTQ6XQN6 538 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 GPR142Q7Z601 462 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 NETO2Q8NC67 525 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 CLEC4CQ8WTT0 213 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 ZC3H15Q8WU90 426 aaKnown RBP15.32■□□□□ 0.04
CHFR-204ENST00000443047 C1orf50Q9BV19 199 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 SOX17Q9H6I2 414 aaPredicted RBP15.32■□□□□ 0.04
CHFR-204ENST00000443047 PARVBQ9HBI1 364 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 GOLGA2P5Q9HBQ8 144 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 NGRNQ9NPE2 291 aaKnown RBP15.32■□□□□ 0.04
CHFR-204ENST00000443047 DUS2Q9NX74 493 aaKnown RBP15.32■□□□□ 0.04
CHFR-204ENST00000443047 CCDC162PA2VCL2 907 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 ZNF839A8K0R7 811 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 TRUB2O95900 331 aaKnown RBP15.32■□□□□ 0.04
CHFR-204ENST00000443047 CHRNGP07510 517 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 IDUAP35475 653 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 OPRL1P41146 370 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 TNFAIP2Q03169 654 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 NHSL2Q5HYW2 709 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 PRR23BQ6ZRT6 265 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 CMC1Q7Z7K0 106 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 RP9Q8TA86 221 aaKnown RBP15.32■□□□□ 0.04
CHFR-204ENST00000443047 ALPK1Q96QP1 1244 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 NXF3Q9H4D5 531 aaKnown RBP15.32■□□□□ 0.04
CHFR-204ENST00000443047 RIC8BQ9NVN3 520 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.32■□□□□ 0.04
CHFR-204ENST00000443047 CNOT11Q9UKZ1 510 aaKnown RBP15.32■□□□□ 0.04
CHFR-204ENST00000443047 AP4E1Q9UPM8 1137 aa15.32■□□□□ 0.04
CHFR-204ENST00000443047 C8BP07358 591 aa15.31■□□□□ 0.04
CHFR-204ENST00000443047 MMP3P08254 477 aa15.31■□□□□ 0.04
CHFR-204ENST00000443047 MPSTP25325 297 aa15.31■□□□□ 0.04
CHFR-204ENST00000443047 TAP1Q03518 808 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms