RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 OMDQ99983 421 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 GPR174Q9BXC1 333 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 CPEB1Q9BZB8 566 aaKnown RBP16.23■□□□□ 0.19
USP39-205ENST00000442708 NOD2Q9HC29 1040 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 RBM22Q9NW64 420 aaKnown RBP eCLIP16.23■□□□□ 0.19
USP39-205ENST00000442708 DMDP11532 3685 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 GPR179Q6PRD1 2367 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 C10orf142B7Z368 130 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 PPP1R12AO14974 1030 aaPredicted RBP16.22■□□□□ 0.19
USP39-205ENST00000442708 MAP3K13O43283 966 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 TJP3O95049 919 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 ITGB7P26010 798 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 CXCR5P32302 372 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 CETN2P41208 172 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 PTGER3P43115 390 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 RPL6Q02878 288 aaKnown RBP16.22■□□□□ 0.19
USP39-205ENST00000442708 ZNF33AQ06730 810 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 NIPAL4Q0D2K0 466 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 ZNF805Q5CZA5 627 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 NCEH1Q6PIU2 408 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 GDPD4Q6W3E5 623 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 ADAT2Q7Z6V5 191 aaKnown RBP16.22■□□□□ 0.19
USP39-205ENST00000442708 ZSWIM9Q86XI8 627 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 CAMK1DQ8IU85 385 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 SLC41A1Q8IVJ1 513 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 NSMCE1Q8WV22 266 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 TFB1MQ8WVM0 346 aaKnown RBP16.22■□□□□ 0.19
USP39-205ENST00000442708 UBE2Q2Q8WVN8 375 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 QKIQ96PU8 341 aaKnown RBP eCLIP16.22■□□□□ 0.19
USP39-205ENST00000442708 NUDCD1Q96RS6 583 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 CARD9Q9H257 536 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 C6orf106Q9H6K1 298 aaPredicted RBP16.22■□□□□ 0.19
USP39-205ENST00000442708 FZD4Q9ULV1 537 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 SMG5Q9UPR3 1016 aaKnown RBP16.22■□□□□ 0.19
USP39-205ENST00000442708 NCKAP1Q9Y2A7 1128 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 ATP8A1Q9Y2Q0 1164 aa16.22■□□□□ 0.19
USP39-205ENST00000442708 SPINT1O43278 529 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 ATP1A1P05023 1023 aaKnown RBP16.21■□□□□ 0.19
USP39-205ENST00000442708 PTPN3P26045 913 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 OXTRP30559 389 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 HSPA9P38646 679 aaKnown RBP16.21■□□□□ 0.19
USP39-205ENST00000442708 ADPRHP54922 357 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 DSC2Q02487 901 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 WASHC5Q12768 1159 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 CCDC181Q5TID7 509 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 ALG1LQ6GMV1 187 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 SLC36A4Q6YBV0 504 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 ERN2Q76MJ5 926 aaKnown RBP16.21■□□□□ 0.19
USP39-205ENST00000442708 BZW1Q7L1Q6 419 aaKnown RBP16.21■□□□□ 0.19
USP39-205ENST00000442708 ARMCX6Q7L4S7 300 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 SLC13A5Q86YT5 568 aaPredicted RBP16.21■□□□□ 0.19
USP39-205ENST00000442708 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.21■□□□□ 0.19
USP39-205ENST00000442708 ARRDC2Q8TBH0 407 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 LRIG1Q96JA1 1093 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 SEMA3CQ99985 751 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 HDAC8Q9BY41 377 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 BTBD1Q9H0C5 482 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 BRD8Q9H0E9 1235 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 KCND1Q9NSA2 647 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 SEPT10Q9P0V9 454 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 JRKLQ9Y4A0 524 aa16.21■□□□□ 0.19
USP39-205ENST00000442708 ZFHX2Q9C0A1 2572 aaPredicted RBP16.2■□□□□ 0.18
USP39-205ENST00000442708 C16orf96A6NNT2 1141 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 H7C0C1 242 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 TRAFD1O14545 582 aaPredicted RBP16.2■□□□□ 0.18
USP39-205ENST00000442708 PLRG1O43660 514 aaKnown RBP16.2■□□□□ 0.18
USP39-205ENST00000442708 KIF5CO60282 957 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 NDUFS2O75306 463 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 SEMA4FO95754 770 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 MMP2P08253 660 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 ITIH2P19823 946 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 RBL1P28749 1068 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 ABL2P42684 1182 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 ATP5OP48047 213 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 EIF3EP60228 445 aaKnown RBP16.2■□□□□ 0.18
USP39-205ENST00000442708 RAD51Q06609 339 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 XRCC4Q13426 336 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 SIX1Q15475 284 aaPredicted RBP16.2■□□□□ 0.18
USP39-205ENST00000442708 SLC45A4Q5BKX6 768 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 LRRC73Q5JTD7 316 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 SEL1L2Q5TEA6 688 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 LPCAT2Q7L5N7 544 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 ASCL5Q7RTU5 278 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 OR14C36Q8NHC7 312 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 ATG4AQ8WYN0 398 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 TUBGCP5Q96RT8 1024 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 WDR24Q96S15 920 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 OSBPL1AQ9BXW6 950 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 SEMA4AQ9H3S1 761 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 SUV39H2Q9H5I1 410 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 SGK2Q9HBY8 427 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 SCUBE2Q9NQ36 999 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 GGT7Q9UJ14 662 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 PCDHGC4Q9Y5F7 938 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 PLXNA2O75051 1894 aa16.2■□□□□ 0.18
USP39-205ENST00000442708 LRRK1Q38SD2 2015 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 GON4LQ3T8J9 2241 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 TSPAN11A1L157 253 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 FAM47DPA6NHR8 397 aa16.19■□□□□ 0.18
USP39-205ENST00000442708 HACD1B0YJ81 288 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms