RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 CXorf51AA0A1B0GTR3 108 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 C2orf71A6NGG8 1288 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 GOLGA8CPA6NN73 597 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 INSIG1O15503 277 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 SLC7A4O43246 635 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 H2AFYO75367 372 aaKnown RBP6.09□□□□□ -1.43
VPS50-205ENST00000441602 CREB1P16220 341 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 HOXD9P28356 352 aaPredicted RBP6.09□□□□□ -1.43
VPS50-205ENST00000441602 CRABP2P29373 138 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 PPARGP37231 505 aaPredicted RBP6.09□□□□□ -1.43
VPS50-205ENST00000441602 SERPINB4P48594 390 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 CLCN5P51795 746 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 PRKAA2P54646 552 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 EPHB1P54762 984 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 PPARDQ03181 441 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 MRNIPQ6NTE8 343 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 NEPROQ6NW34 567 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 CES3Q6UWW8 571 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 RAPH1Q70E73 1250 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 UBE2Q1Q7Z7E8 422 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 NUDCD3Q8IVD9 361 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 AGGF1Q8N302 714 aaeCLIP6.09□□□□□ -1.43
VPS50-205ENST00000441602 ZSCAN18Q8TBC5 510 aaPredicted RBP6.09□□□□□ -1.43
VPS50-205ENST00000441602 SPPL3Q8TCT6 385 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 MZB1Q8WU39 189 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 RMDN1Q96DB5 314 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 SERAC1Q96JX3 654 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 FAM111AQ96PZ2 611 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 ACE2Q9BYF1 805 aaPredicted RBP6.09□□□□□ -1.43
VPS50-205ENST00000441602 RNF38Q9H0F5 515 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 MANSC1Q9H8J5 431 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 ACTR5Q9H9F9 607 aaPredicted RBP6.09□□□□□ -1.43
VPS50-205ENST00000441602 MAN1C1Q9NR34 630 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 SMYD2Q9NRG4 433 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 FGFR1OP2Q9NVK5 253 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 ZNF212Q9UDV6 495 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 CORO1CQ9ULV4 474 aaPredicted RBP6.09□□□□□ -1.43
VPS50-205ENST00000441602 SLC8A2Q9UPR5 921 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 LINC01553A4QN01 128 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 C2orf81A6NN90 581 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 VAPBO95292 243 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 IGSF6O95976 241 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 PEX11BO96011 259 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 KLKB1P03952 638 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 COL6A2P12110 1019 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 NMBRP28336 390 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 WDR4P57081 412 aaKnown RBP6.09□□□□□ -1.44
VPS50-205ENST00000441602 MAXP61244 160 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 SULT2A1Q06520 285 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 GPM6BQ13491 265 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 DMC1Q14565 340 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 SLC1A5Q15758 541 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 TSNAXIP1Q2TAA8 658 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 TEDDM1Q5T9Z0 273 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 ALG1LQ6GMV1 187 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 Q6ZNB5 142 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 FAM217AQ8IXS0 508 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 HS6ST3Q8IZP7 471 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 ZNF398Q8TD17 642 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 PPP4R1Q8TF05 950 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 PRICKLE1Q96MT3 831 aaPredicted RBP6.09□□□□□ -1.44
VPS50-205ENST00000441602 TTC1Q99614 292 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 GORASP1Q9BQQ3 440 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 TRIM55Q9BYV6 548 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 SLC13A1Q9BZW2 595 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 PDFQ9HBH1 243 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 CHRAC1Q9NRG0 131 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 SLC25A13Q9UJS0 675 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 PLLPQ9Y342 182 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 STARD13Q9Y3M8 1113 aa6.09□□□□□ -1.44
VPS50-205ENST00000441602 GOLGB1Q14789 3259 aaKnown RBP6.09□□□□□ -1.44
VPS50-205ENST00000441602 ZCWPW2A0A1B0GU75 182 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 A0A1W2PRU2 124 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 C5orf67F2Z3F1 127 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 LEFTY2O00292 366 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 TPP1O14773 563 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 DCTN3O75935 186 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 TAC1P20366 129 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 SCNN1BP51168 640 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 EPHA5P54756 1037 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 TMPRSS15P98073 1019 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 USP10Q14694 798 aaKnown RBP6.08□□□□□ -1.44
VPS50-205ENST00000441602 KLC3Q6P597 504 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 TMC8Q8IU68 726 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 KIAA1958Q8N8K9 716 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 OR6P1Q8NGX9 317 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 TTC8Q8TAM2 541 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 ARRDC2Q8TBH0 407 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 RDH11Q8TC12 318 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 STYXQ8WUJ0 223 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 ZNF75CPQ92670 426 aaPredicted RBP6.08□□□□□ -1.44
VPS50-205ENST00000441602 E2F7Q96AV8 911 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 MFSD3Q96ES6 412 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 CCDC68Q9H2F9 335 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 ALG13Q9NP73 1137 aaKnown RBP6.08□□□□□ -1.44
VPS50-205ENST00000441602 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.08□□□□□ -1.44
VPS50-205ENST00000441602 CXXC1Q9P0U4 656 aaPredicted RBP6.08□□□□□ -1.44
VPS50-205ENST00000441602 MSRAQ9UJ68 235 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 FBXO5Q9UKT4 447 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 A0A087X1B8 175 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms