RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 ADRB3P13945 408 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 CTNNA1P35221 906 aaKnown RBP18.27■□□□□ 0.52
CPSF4-205ENST00000440514 HOXD12P35452 270 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 ABL2P42684 1182 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 RAD51Q06609 339 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 AASDHQ4L235 1098 aaPredicted RBP18.27■□□□□ 0.52
CPSF4-205ENST00000440514 ZNF805Q5CZA5 627 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 LRRC73Q5JTD7 316 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 TBC1D3GQ6DHY5 549 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 TBC1D3CQ6IPX1 549 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 CCDC50Q8IVM0 306 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 TBC1D3Q8IZP1 549 aaPredicted RBP18.27■□□□□ 0.52
CPSF4-205ENST00000440514 PGBD5Q8N414 524 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 KIAA1524Q8TCG1 905 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 PSKH2Q96QS6 385 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 ORAI3Q9BRQ5 295 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 OSBPL1AQ9BXW6 950 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 HEY1Q9Y5J3 304 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 CAPN6Q9Y6Q1 641 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 PCDH15Q96QU1 1955 aa18.27■□□□□ 0.52
CPSF4-205ENST00000440514 ANKRD36A6QL64 1941 aa18.27■□□□□ 0.51
CPSF4-205ENST00000440514 PTPRZ1P23471 2315 aaPredicted RBP18.27■□□□□ 0.51
CPSF4-205ENST00000440514 GON4LQ3T8J9 2241 aa18.26■□□□□ 0.51
CPSF4-205ENST00000440514 TTC24A2A3L6 582 aaPredicted RBP18.26■□□□□ 0.51
CPSF4-205ENST00000440514 MAT2AP31153 395 aaKnown RBP18.26■□□□□ 0.51
CPSF4-205ENST00000440514 CCR5P51681 352 aa18.26■□□□□ 0.51
CPSF4-205ENST00000440514 IRX4P78413 519 aa18.26■□□□□ 0.51
CPSF4-205ENST00000440514 LMNB2Q03252 620 aa18.26■□□□□ 0.51
CPSF4-205ENST00000440514 TAZQ16635 292 aa18.26■□□□□ 0.51
CPSF4-205ENST00000440514 IFI16Q16666 785 aaKnown RBP18.26■□□□□ 0.51
CPSF4-205ENST00000440514 DUOXA1Q1HG43 343 aa18.26■□□□□ 0.51
CPSF4-205ENST00000440514 KAZNQ674X7 775 aa18.26■□□□□ 0.51
CPSF4-205ENST00000440514 FBXL19Q6PCT2 694 aa18.26■□□□□ 0.51
CPSF4-205ENST00000440514 SRLQ86TD4 932 aa18.26■□□□□ 0.51
CPSF4-205ENST00000440514 NSMCE1Q8WV22 266 aa18.26■□□□□ 0.51
CPSF4-205ENST00000440514 UBE2Q2Q8WVN8 375 aa18.26■□□□□ 0.51
CPSF4-205ENST00000440514 MAK16Q9BXY0 300 aaKnown RBP18.26■□□□□ 0.51
CPSF4-205ENST00000440514 EBF2Q9HAK2 575 aa18.26■□□□□ 0.51
CPSF4-205ENST00000440514 PREBQ9HCU5 417 aa18.26■□□□□ 0.51
CPSF4-205ENST00000440514 SUSD2Q9UGT4 822 aa18.26■□□□□ 0.51
CPSF4-205ENST00000440514 ITM2BQ9Y287 266 aa18.26■□□□□ 0.51
CPSF4-205ENST00000440514 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.26■□□□□ 0.51
CPSF4-205ENST00000440514 ADAMTS9Q9P2N4 1935 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 hCG_1818297A0A087WSY0 165 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 SPINT1O43278 529 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 RNGTTO60942 597 aaKnown RBP18.25■□□□□ 0.51
CPSF4-205ENST00000440514 FTCDO95954 541 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 CTNNA2P26232 953 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 CD27P26842 260 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 MMP13P45452 471 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 MAXP61244 160 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 ADCY2Q08462 1091 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 SLC23A3Q6PIS1 610 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 LAYNQ6UX15 382 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 RABEPKQ7Z6M1 372 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 NT5DC3Q86UY8 548 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 LRRC49Q8IUZ0 686 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 EXD1Q8NHP7 514 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 C1orf216Q8TAB5 229 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 RBM41Q96IZ5 413 aaKnown RBP18.25■□□□□ 0.51
CPSF4-205ENST00000440514 NSMCE3Q96MG7 304 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 ZNF830Q96NB3 372 aaPredicted RBP18.25■□□□□ 0.51
CPSF4-205ENST00000440514 EDEM2Q9BV94 578 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 CPEB1Q9BZB8 566 aaKnown RBP18.25■□□□□ 0.51
CPSF4-205ENST00000440514 KDM4CQ9H3R0 1056 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 CAPN10Q9HC96 672 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 GGT7Q9UJ14 662 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 PACSIN2Q9UNF0 486 aaPredicted RBP18.25■□□□□ 0.51
CPSF4-205ENST00000440514 PCDHA3Q9Y5H8 950 aa18.25■□□□□ 0.51
CPSF4-205ENST00000440514 A0A1B0GTW7 788 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.24■□□□□ 0.51
CPSF4-205ENST00000440514 BCAT2O15382 392 aaPredicted RBP18.24■□□□□ 0.51
CPSF4-205ENST00000440514 CST8O60676 142 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 ZRANB2O95218 330 aaKnown RBP eCLIP18.24■□□□□ 0.51
CPSF4-205ENST00000440514 SERPINF2P08697 491 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 GNSP15586 552 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 PECAM1P16284 738 aaPredicted RBP18.24■□□□□ 0.51
CPSF4-205ENST00000440514 ZFXP17010 805 aaPredicted RBP18.24■□□□□ 0.51
CPSF4-205ENST00000440514 MX2P20592 715 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 CSNK1DP48730 415 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 SCNN1BP51168 640 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 RENBPP51606 427 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 CCDC15Q0P6D6 951 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 TFDP3Q5H9I0 405 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 MARC1Q5VT66 337 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 TIGD7Q6NT04 549 aaPredicted RBP18.24■□□□□ 0.51
CPSF4-205ENST00000440514 TRIM69Q86WT6 500 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 CAMK1DQ8IU85 385 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 RCOR2Q8IZ40 523 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 BBS5Q8N3I7 341 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 CCNYQ8ND76 341 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 CEP76Q8TAP6 659 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 MAML1Q92585 1016 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 ALG3Q92685 438 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 HDAC11Q96DB2 347 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 SLC6A18Q96N87 628 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 TSGA13Q96PP4 275 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 TUBGCP5Q96RT8 1024 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 LGMNQ99538 433 aa18.24■□□□□ 0.51
CPSF4-205ENST00000440514 MGME1Q9BQP7 344 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms