RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 A0A1W2PR77 199 aa23.96■■□□□ 1.43
VARS-217ENST00000440048 VILLO15195 856 aa23.96■■□□□ 1.43
VARS-217ENST00000440048 PALMO75781 387 aa23.96■■□□□ 1.43
VARS-217ENST00000440048 PCDH8O95206 1070 aa23.96■■□□□ 1.43
VARS-217ENST00000440048 KCNK5O95279 499 aa23.96■■□□□ 1.43
VARS-217ENST00000440048 LCA5LO95447 670 aa23.96■■□□□ 1.43
VARS-217ENST00000440048 CER1O95813 267 aa23.96■■□□□ 1.43
VARS-217ENST00000440048 WNT1P04628 370 aa23.96■■□□□ 1.43
VARS-217ENST00000440048 KRT7P08729 469 aa23.96■■□□□ 1.43
VARS-217ENST00000440048 ARHGAP25P42331 645 aa23.96■■□□□ 1.43
VARS-217ENST00000440048 MAGEA1P43355 309 aa23.96■■□□□ 1.43
VARS-217ENST00000440048 TCEAL1Q15170 157 aa23.96■■□□□ 1.43
VARS-217ENST00000440048 SETMARQ53H47 684 aaPredicted RBP23.96■■□□□ 1.43
VARS-217ENST00000440048 NAPEPLDQ6IQ20 393 aa23.96■■□□□ 1.43
VARS-217ENST00000440048 HORMAD1Q86X24 394 aa23.96■■□□□ 1.43
VARS-217ENST00000440048 CCDC170Q8IYT3 715 aa23.96■■□□□ 1.43
VARS-217ENST00000440048 KLK6Q92876 244 aa23.96■■□□□ 1.43
VARS-217ENST00000440048 CALN1Q9BXU9 219 aa23.96■■□□□ 1.43
VARS-217ENST00000440048 ZFR2Q9UPR6 939 aaKnown RBP23.96■■□□□ 1.43
VARS-217ENST00000440048 FADS3Q9Y5Q0 445 aa23.96■■□□□ 1.43
VARS-217ENST00000440048 UPK3BL1B0FP48 263 aa23.95■■□□□ 1.42
VARS-217ENST00000440048 UPK3BL2E5RIL1 263 aa23.95■■□□□ 1.42
VARS-217ENST00000440048 AP1G1O43747 822 aa23.95■■□□□ 1.42
VARS-217ENST00000440048 CD59P13987 128 aa23.95■■□□□ 1.42
VARS-217ENST00000440048 CSRP1P21291 193 aaKnown RBP23.95■■□□□ 1.42
VARS-217ENST00000440048 CD38P28907 300 aa23.95■■□□□ 1.42
VARS-217ENST00000440048 SERPINB6P35237 376 aa23.95■■□□□ 1.42
VARS-217ENST00000440048 ABL2P42684 1182 aa23.95■■□□□ 1.42
VARS-217ENST00000440048 CTSKP43235 329 aa23.95■■□□□ 1.42
VARS-217ENST00000440048 C21orf59P57076 290 aa23.95■■□□□ 1.42
VARS-217ENST00000440048 RFTN1Q14699 578 aaPredicted RBP23.95■■□□□ 1.42
VARS-217ENST00000440048 PDK2Q15119 407 aa23.95■■□□□ 1.42
VARS-217ENST00000440048 ZNF284Q2VY69 593 aa23.95■■□□□ 1.42
VARS-217ENST00000440048 TSEN2Q8NCE0 465 aaKnown RBP23.95■■□□□ 1.42
VARS-217ENST00000440048 RAB7BQ96AH8 199 aa23.95■■□□□ 1.42
VARS-217ENST00000440048 CPEB1Q9BZB8 566 aaKnown RBP23.95■■□□□ 1.42
VARS-217ENST00000440048 FNDC3AQ9Y2H6 1198 aaKnown RBP23.95■■□□□ 1.42
VARS-217ENST00000440048 CEP295Q9C0D2 2601 aa23.95■■□□□ 1.42
VARS-217ENST00000440048 ANKRD36A6QL64 1941 aa23.94■■□□□ 1.42
VARS-217ENST00000440048 PRLRP16471 622 aa23.94■■□□□ 1.42
VARS-217ENST00000440048 RGRP47804 291 aa23.94■■□□□ 1.42
VARS-217ENST00000440048 NOVA1P51513 510 aaKnown RBP23.94■■□□□ 1.42
VARS-217ENST00000440048 SLC14A1Q13336 389 aa23.94■■□□□ 1.42
VARS-217ENST00000440048 SEL1L3Q68CR1 1132 aa23.94■■□□□ 1.42
VARS-217ENST00000440048 PSAPL1Q6NUJ1 521 aa23.94■■□□□ 1.42
VARS-217ENST00000440048 PIP4P1Q86T03 277 aa23.94■■□□□ 1.42
VARS-217ENST00000440048 MAP7D3Q8IWC1 876 aa23.94■■□□□ 1.42
VARS-217ENST00000440048 DEFB124Q8NES8 71 aa23.94■■□□□ 1.42
VARS-217ENST00000440048 PCDH19Q8TAB3 1148 aa23.94■■□□□ 1.42
VARS-217ENST00000440048 ZNF599Q96NL3 588 aa23.94■■□□□ 1.42
VARS-217ENST00000440048 ZNF670Q9BS34 389 aa23.94■■□□□ 1.42
VARS-217ENST00000440048 CINPQ9BW66 212 aaPredicted RBP23.94■■□□□ 1.42
VARS-217ENST00000440048 KCNK3O14649 394 aa23.93■■□□□ 1.42
VARS-217ENST00000440048 GIPC1O14908 333 aa23.93■■□□□ 1.42
VARS-217ENST00000440048 SLC31A1O15431 190 aa23.93■■□□□ 1.42
VARS-217ENST00000440048 PIGNO95427 931 aa23.93■■□□□ 1.42
VARS-217ENST00000440048 FECHP22830 423 aa23.93■■□□□ 1.42
VARS-217ENST00000440048 CYLC1P35663 651 aaPredicted RBP23.93■■□□□ 1.42
VARS-217ENST00000440048 CSNK1DP48730 415 aa23.93■■□□□ 1.42
VARS-217ENST00000440048 TMEM259Q4ZIN3 620 aa23.93■■□□□ 1.42
VARS-217ENST00000440048 ANKRD20A8PQ5CZ79 823 aa23.93■■□□□ 1.42
VARS-217ENST00000440048 ZFYVE27Q5T4F4 411 aa23.93■■□□□ 1.42
VARS-217ENST00000440048 TMCO4Q5TGY1 634 aa23.93■■□□□ 1.42
VARS-217ENST00000440048 SRLQ86TD4 932 aa23.93■■□□□ 1.42
VARS-217ENST00000440048 SKA1Q96BD8 255 aa23.93■■□□□ 1.42
VARS-217ENST00000440048 FEM1CQ96JP0 617 aa23.93■■□□□ 1.42
VARS-217ENST00000440048 DKK3Q9UBP4 350 aa23.93■■□□□ 1.42
VARS-217ENST00000440048 PCDHA13Q9Y5I0 950 aa23.93■■□□□ 1.42
VARS-217ENST00000440048 EPG5Q9HCE0 2579 aa23.93■■□□□ 1.42
VARS-217ENST00000440048 PRAMEF26H0Y7S4 382 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 SPINT1O43278 529 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 MAFKO60675 156 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 PEX11BO96011 259 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 ZNF883P0CG24 379 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 RPS21P63220 83 aaKnown RBP23.92■■□□□ 1.42
VARS-217ENST00000440048 SLC10A7Q0GE19 358 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 LBRQ14739 615 aaKnown RBP23.92■■□□□ 1.42
VARS-217ENST00000440048 GRM3Q14832 879 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 PAFAH1B3Q15102 231 aaKnown RBP23.92■■□□□ 1.42
VARS-217ENST00000440048 SPA17Q15506 151 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 ZNF423Q2M1K9 1284 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 SLC45A4Q5BKX6 768 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 NCBP2-AS2Q69YL0 99 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 KIAA1161Q6NSJ0 714 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 TTC7BQ86TV6 843 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 ATPAF2Q8N5M1 289 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 MFSD2AQ8NA29 543 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 RAPGEF5Q92565 580 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 FAF2Q96CS3 445 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 TM7SF3Q9NS93 570 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 SEPT3Q9UH03 358 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 GGT7Q9UJ14 662 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 ITM2BQ9Y287 266 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 CA5BQ9Y2D0 317 aa23.92■■□□□ 1.42
VARS-217ENST00000440048 SOWAHDA6NJG2 315 aa23.91■■□□□ 1.42
VARS-217ENST00000440048 H0Y8X5 98 aa23.91■■□□□ 1.42
VARS-217ENST00000440048 TLR4O00206 839 aa23.91■■□□□ 1.42
VARS-217ENST00000440048 MUSKO15146 869 aa23.91■■□□□ 1.42
VARS-217ENST00000440048 TSPAN6O43657 245 aa23.91■■□□□ 1.42
VARS-217ENST00000440048 MFSD11O43934 449 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms