RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 ASIC2Q16515 512 aa16.51■□□□□ 0.23
SNRPD3-204ENST00000439775 ATXN7L2Q5T6C5 722 aaPredicted RBP16.51■□□□□ 0.23
SNRPD3-204ENST00000439775 CAVIN1Q6NZI2 390 aaKnown RBP16.51■□□□□ 0.23
SNRPD3-204ENST00000439775 GDPD4Q6W3E5 623 aa16.51■□□□□ 0.23
SNRPD3-204ENST00000439775 Q6ZSR6 202 aa16.51■□□□□ 0.23
SNRPD3-204ENST00000439775 PTAR1Q7Z6K3 402 aaPredicted RBP16.51■□□□□ 0.23
SNRPD3-204ENST00000439775 SLC25A45Q8N413 288 aa16.51■□□□□ 0.23
SNRPD3-204ENST00000439775 PDCD7Q8N8D1 485 aaKnown RBP16.51■□□□□ 0.23
SNRPD3-204ENST00000439775 OR4C6Q8NH72 309 aa16.51■□□□□ 0.23
SNRPD3-204ENST00000439775 FNIP1Q8TF40 1166 aa16.51■□□□□ 0.23
SNRPD3-204ENST00000439775 BMFQ96LC9 184 aa16.51■□□□□ 0.23
SNRPD3-204ENST00000439775 C1QTNF2Q9BXJ5 285 aa16.51■□□□□ 0.23
SNRPD3-204ENST00000439775 EDEM3Q9BZQ6 932 aa16.51■□□□□ 0.23
SNRPD3-204ENST00000439775 KLC2Q9H0B6 622 aa16.51■□□□□ 0.23
SNRPD3-204ENST00000439775 HAUS4Q9H6D7 363 aa16.51■□□□□ 0.23
SNRPD3-204ENST00000439775 AP4E1Q9UPM8 1137 aa16.51■□□□□ 0.23
SNRPD3-204ENST00000439775 LAMA5O15230 3695 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 DSPP15924 2871 aaKnown RBP16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 SPTY2D1-AS1A0A0U1RR47 76 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 POM121BA6NF01 834 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 TMCO5BA8MYB1 307 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 NEMP1O14524 444 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 RAD51BO15315 384 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 ATMINO43313 823 aaPredicted RBP16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 PIAS2O75928 621 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 PAK4O96013 591 aaPredicted RBP16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 PSMA2P25787 234 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 RHOAP61586 193 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 SGCGQ13326 291 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 HS1BP3Q53T59 392 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 E4F1Q66K89 784 aaPredicted RBP16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 ZNF571Q7Z3V5 609 aaPredicted RBP16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 MARCH9Q86YJ5 346 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 KLHL32Q96NJ5 620 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 KLF6Q99612 283 aaPredicted RBP16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 FUCA2Q9BTY2 467 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 LRRC19Q9H756 370 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 PDFQ9HBH1 243 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 UCKL1Q9NWZ5 548 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 DKK3Q9UBP4 350 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 GGT7Q9UJ14 662 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 ITM2BQ9Y287 266 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 FAM208BQ5VWN6 2430 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 DOCK9Q9BZ29 2069 aa16.5■□□□□ 0.23
SNRPD3-204ENST00000439775 TRABD2BA6NFA1 517 aa16.49■□□□□ 0.23
SNRPD3-204ENST00000439775 TMEM191CA6NGB0 347 aa16.49■□□□□ 0.23
SNRPD3-204ENST00000439775 IGLON5A6NGN9 336 aa16.49■□□□□ 0.23
SNRPD3-204ENST00000439775 TRIM38O00635 465 aa16.49■□□□□ 0.23
SNRPD3-204ENST00000439775 FPGTO14772 594 aa16.49■□□□□ 0.23
SNRPD3-204ENST00000439775 SIGLEC6O43699 453 aa16.49■□□□□ 0.23
SNRPD3-204ENST00000439775 NDST2P52849 883 aa16.49■□□□□ 0.23
SNRPD3-204ENST00000439775 IQCB1Q15051 598 aa16.49■□□□□ 0.23
SNRPD3-204ENST00000439775 FIGNQ5HY92 759 aa16.49■□□□□ 0.23
SNRPD3-204ENST00000439775 HES3Q5TGS1 186 aa16.49■□□□□ 0.23
SNRPD3-204ENST00000439775 PARGQ86W56 976 aa16.49■□□□□ 0.23
SNRPD3-204ENST00000439775 RFFLQ8WZ73 363 aa16.49■□□□□ 0.23
SNRPD3-204ENST00000439775 CPEB1Q9BZB8 566 aaKnown RBP16.49■□□□□ 0.23
SNRPD3-204ENST00000439775 NLGN3Q9NZ94 848 aa16.49■□□□□ 0.23
SNRPD3-204ENST00000439775 LHX3Q9UBR4 397 aa16.49■□□□□ 0.23
SNRPD3-204ENST00000439775 UBA2Q9UBT2 640 aaPredicted RBP16.49■□□□□ 0.23
SNRPD3-204ENST00000439775 SCINQ9Y6U3 715 aa16.49■□□□□ 0.23
SNRPD3-204ENST00000439775 CELSR3Q9NYQ7 3312 aa16.49■□□□□ 0.23
SNRPD3-204ENST00000439775 EEF2KO00418 725 aaKnown RBP16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 DDX3XO00571 662 aaKnown RBP eCLIP16.48■□□□□ 0.236e-16■■■□□ 16.6
SNRPD3-204ENST00000439775 FTLP02792 175 aaPredicted RBP16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 GIMD1P0DJR0 217 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 MYBL1P10243 752 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 ALPPL2P10696 532 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 JUPP14923 745 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 NME1P15531 152 aaKnown RBP16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 SUOXP51687 545 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 ZNF135P52742 658 aaPredicted RBP16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 PFN3P60673 137 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 HNRNPKP61978 463 aaKnown RBP eCLIP16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 KLHL30Q0D2K2 578 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 FZD2Q14332 565 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 GRM3Q14832 879 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 ERMARDQ5T6L9 678 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 TTC7BQ86TV6 843 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 DNAAF5Q86Y56 855 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 PSTKQ8IV42 348 aaKnown RBP16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 CACTIN-AS1Q8N1I8 211 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 ARFGAP1Q8N6T3 406 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 HCAR2Q8TDS4 363 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 TRIM11Q96F44 468 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 NAP1L5Q96NT1 182 aaPredicted RBP16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 PEBP4Q96S96 227 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 SNRNP25Q9BV90 132 aaKnown RBP16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 DHX35Q9H5Z1 703 aaKnown RBP16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 GPATCH2LQ9NWQ4 482 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 DNAJC28Q9NX36 388 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 GPSM3Q9Y4H4 160 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 TRPM6Q9BX84 2022 aa16.48■□□□□ 0.23
SNRPD3-204ENST00000439775 ITPR1Q14643 2758 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 TSPAN11A1L157 253 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 NEMP2A6NFY4 417 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 H3BM21 787 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 SCAMP1O15126 338 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 PRAMEF11O60813 436 aa16.47■□□□□ 0.23
SNRPD3-204ENST00000439775 RNF8O76064 485 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms