RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 TMC6Q7Z403 805 aa18.72■□□□□ 0.59
AC004540.1-201ENST00000439120 TTC7BQ86TV6 843 aa18.72■□□□□ 0.59
AC004540.1-201ENST00000439120 HMCESQ96FZ2 354 aa18.72■□□□□ 0.59
AC004540.1-201ENST00000439120 BMFQ96LC9 184 aa18.72■□□□□ 0.59
AC004540.1-201ENST00000439120 TTYH3Q9C0H2 523 aa18.72■□□□□ 0.59
AC004540.1-201ENST00000439120 PARVAQ9NVD7 372 aa18.72■□□□□ 0.59
AC004540.1-201ENST00000439120 EVA1BQ9NVM1 165 aa18.72■□□□□ 0.59
AC004540.1-201ENST00000439120 UCKL1Q9NWZ5 548 aa18.72■□□□□ 0.59
AC004540.1-201ENST00000439120 ITM2BQ9Y287 266 aa18.72■□□□□ 0.59
AC004540.1-201ENST00000439120 GPSM3Q9Y4H4 160 aa18.72■□□□□ 0.59
AC004540.1-201ENST00000439120 POM121BA6NF01 834 aa18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 TEX33O43247 280 aa18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 XPAP23025 273 aaPredicted RBP18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 PSMA2P25787 234 aa18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 HTR7P34969 479 aa18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 E2F1Q01094 437 aa18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 FGL2Q14314 439 aa18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 INO80DQ53TQ3 878 aaPredicted RBP18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 ZNF542PQ5EBM4 170 aa18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 PPP1R15BQ5SWA1 713 aa18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 IRF2BP2Q7Z5L9 587 aa18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 PARGQ86W56 976 aa18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 VCPIP1Q96JH7 1222 aa18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 LENG8Q96PV6 779 aaPredicted RBP18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 BPIFA3Q9BQP9 254 aa18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 C1QTNF7Q9BXJ2 289 aa18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 C1QTNF2Q9BXJ5 285 aa18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 NOL6Q9H6R4 1146 aaKnown RBP18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 TMEM63CQ9P1W3 806 aa18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 AK5Q9Y6K8 562 aa18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 FAM208BQ5VWN6 2430 aa18.71■□□□□ 0.59
AC004540.1-201ENST00000439120 PKD1L2Q7Z442 2459 aa18.71■□□□□ 0.58
AC004540.1-201ENST00000439120 TDRD6O60522 2096 aaKnown RBP18.7■□□□□ 0.58
AC004540.1-201ENST00000439120 LRRC53A6NM62 1247 aa18.7■□□□□ 0.58
AC004540.1-201ENST00000439120 RAD51BO15315 384 aa18.7■□□□□ 0.58
AC004540.1-201ENST00000439120 SERINC3Q13530 473 aa18.7■□□□□ 0.58
AC004540.1-201ENST00000439120 PDE1CQ14123 709 aaPredicted RBP18.7■□□□□ 0.58
AC004540.1-201ENST00000439120 LRRC73Q5JTD7 316 aa18.7■□□□□ 0.58
AC004540.1-201ENST00000439120 DENND6BQ8NEG7 585 aa18.7■□□□□ 0.58
AC004540.1-201ENST00000439120 CXorf40AQ8TE69 158 aa18.7■□□□□ 0.58
AC004540.1-201ENST00000439120 HNRNPLLQ8WVV9 542 aaKnown RBP18.7■□□□□ 0.58
AC004540.1-201ENST00000439120 DUSP23Q9BVJ7 150 aa18.7■□□□□ 0.58
AC004540.1-201ENST00000439120 RTN4Q9NQC3 1192 aaKnown RBP18.7■□□□□ 0.58
AC004540.1-201ENST00000439120 TAS2R14Q9NYV8 317 aa18.7■□□□□ 0.58
AC004540.1-201ENST00000439120 NLGN3Q9NZ94 848 aa18.7■□□□□ 0.58
AC004540.1-201ENST00000439120 UBA2Q9UBT2 640 aaPredicted RBP18.7■□□□□ 0.58
AC004540.1-201ENST00000439120 GGT7Q9UJ14 662 aa18.7■□□□□ 0.58
AC004540.1-201ENST00000439120 AP4E1Q9UPM8 1137 aa18.7■□□□□ 0.58
AC004540.1-201ENST00000439120 CLCA2Q9UQC9 943 aa18.7■□□□□ 0.58
AC004540.1-201ENST00000439120 ADAMTS20P59510 1910 aa18.7■□□□□ 0.58
AC004540.1-201ENST00000439120 SPTY2D1-AS1A0A0U1RR47 76 aa18.69■□□□□ 0.58
AC004540.1-201ENST00000439120 WASH4PA8MWX3 477 aa18.69■□□□□ 0.58
AC004540.1-201ENST00000439120 DAPK3O43293 454 aa18.69■□□□□ 0.58
AC004540.1-201ENST00000439120 RNF8O76064 485 aa18.69■□□□□ 0.58
AC004540.1-201ENST00000439120 THOP1P52888 689 aa18.69■□□□□ 0.58
AC004540.1-201ENST00000439120 MAMLD1Q13495 774 aa18.69■□□□□ 0.58
AC004540.1-201ENST00000439120 FZD2Q14332 565 aa18.69■□□□□ 0.58
AC004540.1-201ENST00000439120 COL28A1Q2UY09 1125 aa18.69■□□□□ 0.58
AC004540.1-201ENST00000439120 CFAP58Q5T655 872 aa18.69■□□□□ 0.58
AC004540.1-201ENST00000439120 UMODL1-AS1Q8N2C9 162 aa18.69■□□□□ 0.58
AC004540.1-201ENST00000439120 ASB12Q8WXK4 309 aa18.69■□□□□ 0.58
AC004540.1-201ENST00000439120 BAP1Q92560 729 aa18.69■□□□□ 0.58
AC004540.1-201ENST00000439120 EXOC2Q96KP1 924 aa18.69■□□□□ 0.58
AC004540.1-201ENST00000439120 DCBLD2Q96PD2 775 aa18.69■□□□□ 0.58
AC004540.1-201ENST00000439120 KLC2Q9H0B6 622 aa18.69■□□□□ 0.58
AC004540.1-201ENST00000439120 DHX35Q9H5Z1 703 aaKnown RBP18.69■□□□□ 0.58
AC004540.1-201ENST00000439120 ANKRD11Q6UB99 2663 aaPredicted RBP18.69■□□□□ 0.58
AC004540.1-201ENST00000439120 EIF3CLB5ME19 914 aaKnown RBP18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 EEF2KO00418 725 aaKnown RBP18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 SCAMP1O15126 338 aa18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 ATMINO43313 823 aaPredicted RBP18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 TM7SF2O76062 418 aa18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 CSF2P04141 144 aa18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 NME1P15531 152 aaKnown RBP18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 DUSP3P51452 185 aaPredicted RBP18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 OGDHQ02218 1023 aa18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 SEMG2Q02383 582 aa18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 PTK2BQ14289 1009 aa18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 VPS36Q86VN1 386 aa18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 DNAAF5Q86Y56 855 aa18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 NETO2Q8NC67 525 aa18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 ZNF548Q8NEK5 533 aaPredicted RBP18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 EIF3CQ99613 913 aaKnown RBP18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 HAUS4Q9H6D7 363 aa18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 SCUBE2Q9NQ36 999 aa18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 GPR27Q9NS67 375 aa18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 GPATCH2LQ9NWQ4 482 aa18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 PCSK1NQ9UHG2 260 aa18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 MFHAS1Q9Y4C4 1052 aa18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 DSPP15924 2871 aaKnown RBP18.68■□□□□ 0.58
AC004540.1-201ENST00000439120 MYLKQ15746 1914 aa18.67■□□□□ 0.58
AC004540.1-201ENST00000439120 ARHGAP42A6NI28 874 aa18.67■□□□□ 0.58
AC004540.1-201ENST00000439120 AREL1O15033 823 aa18.67■□□□□ 0.58
AC004540.1-201ENST00000439120 PRPSAP2O60256 369 aa18.67■□□□□ 0.58
AC004540.1-201ENST00000439120 MMP20O60882 483 aa18.67■□□□□ 0.58
AC004540.1-201ENST00000439120 CKMT1AP12532 417 aa18.67■□□□□ 0.58
AC004540.1-201ENST00000439120 JUNDP17535 347 aa18.67■□□□□ 0.58
AC004540.1-201ENST00000439120 ZNF165P49910 485 aa18.67■□□□□ 0.58
AC004540.1-201ENST00000439120 NDST2P52849 883 aa18.67■□□□□ 0.58
AC004540.1-201ENST00000439120 INSM1Q01101 510 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms