RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 PCDHGB5Q9Y5G0 923 aa3.88□□□□□ -1.79
TRAPPC13-204ENST00000438419 CYP46A1Q9Y6A2 500 aa3.88□□□□□ -1.79
TRAPPC13-204ENST00000438419 PABPN1LA6NDY0 278 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 B4E171 279 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 SPTLC2O15270 562 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 CLDN7O95471 211 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 URODP06132 367 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 ARSBP15848 533 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 TSPAN7P41732 249 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 PPP3CCP48454 512 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 ENTPD1P49961 510 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 CCT4P50991 539 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 CASP6P55212 293 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 P2RX3P56373 397 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 KRTAP10-6P60371 365 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 ZP1P60852 638 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 PRICKLE4Q2TBC4 344 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 ZNF667Q5HYK9 610 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 UBAP2Q5T6F2 1119 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 DCAF12L2Q5VW00 463 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 DAB2IPQ5VWQ8 1189 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 TMEM81Q6P7N7 255 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 FAM83HQ6ZRV2 1179 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 C1orf122Q6ZSJ8 110 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 FAM160B2Q86V87 743 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 ARMC8Q8IUR7 673 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 C9orf106Q8NAJ2 232 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 MCPH1Q8NEM0 835 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 RASSF8Q8NHQ8 419 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 RNF183Q96D59 192 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 VEZTQ9HBM0 779 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 SPATS2LQ9NUQ6 558 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 TERF2IPQ9NYB0 399 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 NCKIPSDQ9NZQ3 722 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 RPS10-NUDT3A0A1W2PQS6 291 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 FAM90A10PA6NDY2 464 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 CBY3A6NI87 242 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 MS4A18H0YCH9 400 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 SLC25A17O43808 307 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 OAZ2O95190 189 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 RTN3O95197 1032 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 F9P00740 461 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 CRYABP02511 175 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 CYP1A2P05177 515 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 PCNAP12004 261 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 COX7A2P14406 83 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 HOXB2P14652 356 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 ZNF8P17098 575 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 PTPN2P17706 415 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 CYP4A11Q02928 519 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 GPR18Q14330 331 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 PLEKHO1Q53GL0 409 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 FAM69AQ5T7M9 428 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 SERTAD4-AS1Q5TG53 156 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 OTUD1Q5VV17 481 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 CCDC30Q5VVM6 783 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 ATG9BQ674R7 924 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 PATL1Q86TB9 770 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 TBC1D1Q86TI0 1168 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 TADA2BQ86TJ2 420 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 PALB2Q86YC2 1186 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 RBFAQ8N0V3 343 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 TEX45Q8NA69 505 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 NFKBIDQ8NI38 313 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 TMEM18Q96B42 140 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 OTULINQ96BN8 352 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 GFM1Q96RP9 751 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 POLDIP3Q9BY77 421 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 LHPPQ9H008 270 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 RBM38Q9H0Z9 239 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 TTYH1Q9H313 450 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 SNTG1Q9NSN8 517 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 OLA1Q9NTK5 396 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 BABAM1Q9NWV8 329 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 KCND2Q9NZV8 630 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 MPP6Q9NZW5 540 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 KIAA1456Q9P272 454 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 AASSQ9UDR5 926 aa3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 FBXO9Q9UK97 447 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 SRPRBQ9Y5M8 271 aaKnown RBP3.87□□□□□ -1.79
TRAPPC13-204ENST00000438419 ADGRF5Q8IZF2 1346 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 TEX13CA0A0J9YWL9 993 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 CD8B2A6NJW9 211 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 SLC2A4P14672 509 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 CAPN3P20807 821 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 GNLYP22749 145 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 POU1F1P28069 291 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 FMO4P31512 558 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 DCTDP32321 178 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 TTKP33981 857 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 CASP2P42575 452 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 RFX2P48378 723 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 RXRGP48443 463 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 PGGT1BP53609 377 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 UFM1P61960 85 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 FAM27E3Q08E93 113 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 HYIQ5T013 277 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 CLEC4GQ6UXB4 293 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 DSTYKQ6XUX3 929 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms