RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 CEP97Q8IW35 865 aa18.8■□□□□ 0.6
CLK1-205ENST00000434813 KBTBD2Q8IY47 623 aa18.8■□□□□ 0.6
CLK1-205ENST00000434813 SLC25A41Q8N5S1 370 aa18.8■□□□□ 0.6
CLK1-205ENST00000434813 SLAIN1Q8ND83 568 aa18.8■□□□□ 0.6
CLK1-205ENST00000434813 SHKBP1Q8TBC3 707 aa18.8■□□□□ 0.6
CLK1-205ENST00000434813 AGR3Q8TD06 166 aa18.8■□□□□ 0.6
CLK1-205ENST00000434813 FATE1Q969F0 183 aa18.8■□□□□ 0.6
CLK1-205ENST00000434813 RTKNQ9BST9 563 aa18.8■□□□□ 0.6
CLK1-205ENST00000434813 SHCBP1LQ9BZQ2 653 aa18.8■□□□□ 0.6
CLK1-205ENST00000434813 ZCWPW1Q9H0M4 648 aa18.8■□□□□ 0.6
CLK1-205ENST00000434813 TRPV6Q9H1D0 765 aa18.8■□□□□ 0.6
CLK1-205ENST00000434813 NOL6Q9H6R4 1146 aaKnown RBP18.8■□□□□ 0.6
CLK1-205ENST00000434813 HMX1Q9NP08 348 aaPredicted RBP18.8■□□□□ 0.6
CLK1-205ENST00000434813 VTI1BQ9UEU0 232 aa18.8■□□□□ 0.6
CLK1-205ENST00000434813 NUDT5Q9UKK9 219 aa18.8■□□□□ 0.6
CLK1-205ENST00000434813 B4GALT3O60512 393 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 NEBLO76041 1014 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 PEX11BO96011 259 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 PDHA1P08559 390 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 CHRNA4P43681 627 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 CNGA3Q16281 694 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 ZNF470Q6ECI4 717 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 KDELC1Q6UW63 502 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 KIAA0408Q6ZU52 694 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 TMC7Q7Z402 723 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 SCN4BQ8IWT1 228 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 UMODL1-AS1Q8N2C9 162 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 SLC39A13Q96H72 371 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 SLC25A51Q9H1U9 297 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 ARNT2Q9HBZ2 717 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 PPM1HQ9ULR3 514 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 SQORQ9Y6N5 450 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 A0A087X1B8 175 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 SLC22A2O15244 555 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 FKTNO75072 461 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 SLC2A3P11169 496 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 EPHB1P54762 984 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 NAGLUP54802 743 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 ASPHQ12797 758 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 ZNF460Q14592 562 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 MON1AQ86VX9 555 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 DEFB107AQ8IZN7 70 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 PDCD6IPQ8WUM4 868 aaKnown RBP18.79■□□□□ 0.6
CLK1-205ENST00000434813 FUBP3Q96I24 572 aaKnown RBP eCLIP18.79■□□□□ 0.63e-7■■■□□ 18.4
CLK1-205ENST00000434813 MRPL46Q9H2W6 279 aaKnown RBP18.79■□□□□ 0.6
CLK1-205ENST00000434813 CYP4F11Q9HBI6 524 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 S100A14Q9HCY8 104 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 ATP13A1Q9HD20 1204 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 WBP1LQ9NX94 342 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 ABI2Q9NYB9 513 aaPredicted RBP18.79■□□□□ 0.6
CLK1-205ENST00000434813 SSX2IPQ9Y2D8 614 aa18.79■□□□□ 0.6
CLK1-205ENST00000434813 TMEM189-UBE2V1I3L0A0 370 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 GRID2O43424 1007 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 DLX3O60479 287 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 OAZ2O95190 189 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 KPNA2P52292 529 aaKnown RBP18.78■□□□□ 0.6
CLK1-205ENST00000434813 NDST2P52849 883 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 WNT3AP56704 352 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 DSC1Q08554 894 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 NSUN2Q08J23 767 aaKnown RBP eCLIP18.78■□□□□ 0.6
CLK1-205ENST00000434813 DLG1Q12959 904 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 HNRNPDQ14103 355 aaKnown RBP18.78■□□□□ 0.6
CLK1-205ENST00000434813 SEPT6Q14141 434 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 ZNF683Q8IZ20 524 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 DCP1BQ8IZD4 617 aaKnown RBP18.78■□□□□ 0.6
CLK1-205ENST00000434813 ELMO2Q96JJ3 720 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 RANBP9Q96S59 729 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 TSEN34Q9BSV6 310 aaKnown RBP18.78■□□□□ 0.6
CLK1-205ENST00000434813 PRDM5Q9NQX1 630 aaPredicted RBP18.78■□□□□ 0.6
CLK1-205ENST00000434813 SAGE1Q9NXZ1 904 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 LOC100653049A0A140TA62 436 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 HEATR9A2RTY3 570 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 KRT34O76011 436 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 PDE5AO76074 875 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 RHOQP17081 205 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 TFEBP19484 476 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 CCR10P46092 362 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 TAS2R39P59534 338 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 POU4F1Q01851 419 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 TBL3Q12788 808 aaKnown RBP18.78■□□□□ 0.6
CLK1-205ENST00000434813 PEX6Q13608 980 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 CCNIQ14094 377 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 TSTD2Q5T7W7 516 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 CAPRIN2Q6IMN6 1127 aaKnown RBP18.78■□□□□ 0.6
CLK1-205ENST00000434813 GLB1LQ6UWU2 654 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 ACAD11Q709F0 780 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 LSMEM2Q8N112 164 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 NXNL1Q96CM4 212 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 MOCOSQ96EN8 888 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 IMP4Q96G21 291 aaKnown RBP18.78■□□□□ 0.6
CLK1-205ENST00000434813 C8orf48Q96LL4 319 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 LENG8Q96PV6 779 aaPredicted RBP18.78■□□□□ 0.6
CLK1-205ENST00000434813 ATXN3LQ9H3M9 355 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 ZNF385DQ9H6B1 395 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 WDR55Q9H6Y2 383 aaPredicted RBP18.78■□□□□ 0.6
CLK1-205ENST00000434813 FBXO5Q9UKT4 447 aa18.78■□□□□ 0.6
CLK1-205ENST00000434813 MRPL42Q9Y6G3 142 aaKnown RBP18.78■□□□□ 0.6
CLK1-205ENST00000434813 GOLGA8QA0A0J9YX86 632 aa18.77■□□□□ 0.6
CLK1-205ENST00000434813 GOLGA8OA6NCC3 632 aa18.77■□□□□ 0.6
CLK1-205ENST00000434813 GOLGA8NF8WBI6 632 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms