RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 UGT2B4P06133 528 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 TNNT1P13805 278 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 ZFXP17010 805 aaPredicted RBP18.61■□□□□ 0.57
HLA-F-220ENST00000434407 MX2P20592 715 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 CTNNA2P26232 953 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 CD27P26842 260 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 MAOBP27338 520 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 HSPA9P38646 679 aaKnown RBP18.61■□□□□ 0.57
HLA-F-220ENST00000434407 RENBPP51606 427 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 NEK3P51956 506 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 GRM3Q14832 879 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 SF3A2Q15428 464 aaKnown RBP18.61■□□□□ 0.57
HLA-F-220ENST00000434407 IFI16Q16666 785 aaKnown RBP18.61■□□□□ 0.57
HLA-F-220ENST00000434407 PARS2Q7L3T8 475 aaKnown RBP18.61■□□□□ 0.57
HLA-F-220ENST00000434407 TRIM69Q86WT6 500 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 RCOR2Q8IZ40 523 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 RGL4Q8IZJ4 473 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 RYBPQ8N488 228 aaPredicted RBP18.61■□□□□ 0.57
HLA-F-220ENST00000434407 RNF10Q8N5U6 811 aaKnown RBP18.61■□□□□ 0.57
HLA-F-220ENST00000434407 EXD1Q8NHP7 514 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 HCAR2Q8TDS4 363 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 MAML1Q92585 1016 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 EXOC2Q96KP1 924 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 TUBGCP5Q96RT8 1024 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 CINPQ9BW66 212 aaPredicted RBP18.61■□□□□ 0.57
HLA-F-220ENST00000434407 SUSD2Q9UGT4 822 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 EIF2B4Q9UI10 523 aaKnown RBP18.61■□□□□ 0.57
HLA-F-220ENST00000434407 PCDHA3Q9Y5H8 950 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.61■□□□□ 0.57
HLA-F-220ENST00000434407 DNAH14Q0VDD8 3507 aa18.61■□□□□ 0.57
HLA-F-220ENST00000434407 C16orf96A6NNT2 1141 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 APOL1O14791 398 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 KHNYNO15037 678 aaKnown RBP18.6■□□□□ 0.57
HLA-F-220ENST00000434407 AP1G1O43747 822 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 FSBPO95073 299 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 ZRANB2O95218 330 aaKnown RBP eCLIP18.6■□□□□ 0.57
HLA-F-220ENST00000434407 SERPINF2P08697 491 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 ADRB3P13945 408 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 CR2P20023 1033 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 CCNCP24863 283 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 PEX5P50542 639 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 NAP1L1P55209 391 aaKnown RBP18.6■□□□□ 0.57
HLA-F-220ENST00000434407 LMNB2Q03252 620 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 HNRNPDQ14103 355 aaKnown RBP18.6■□□□□ 0.57
HLA-F-220ENST00000434407 TCEAL6Q6IPX3 200 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 NEK5Q6P3R8 708 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 GDPD4Q6W3E5 623 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 SPOCD1Q6ZMY3 1216 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 ZNF662Q6ZS27 426 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 SRLQ86TD4 932 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 NT5DC3Q86UY8 548 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 PGBD5Q8N414 524 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 TCEAL3Q969E4 200 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 HDAC11Q96DB2 347 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 KLHL32Q96NJ5 620 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 MGME1Q9BQP7 344 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 MAK16Q9BXY0 300 aaKnown RBP18.6■□□□□ 0.57
HLA-F-220ENST00000434407 EBF2Q9HAK2 575 aa18.6■□□□□ 0.57
HLA-F-220ENST00000434407 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.6■□□□□ 0.57
HLA-F-220ENST00000434407 LRRK1Q38SD2 2015 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 TBC1D3DA0A087WVF3 549 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 TBC1D3IA0A087WXS9 549 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 TBC1D3EA0A087X179 549 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 TBC1D3KA0A087X1G2 549 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 A0A1B0GTW7 788 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 A0A1W2PPC4 97 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 TSPAN11A1L157 253 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 MACROD2A1Z1Q3 448 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 CCDC66A2RUB6 948 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 TBC1D3FA6NER0 549 aaPredicted RBP18.59■□□□□ 0.57
HLA-F-220ENST00000434407 FAM47DPA6NHR8 397 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 TBC1D3LB9A6J9 549 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 MATN3O15232 486 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 TBC1D3HP0C7X1 549 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 GNSP15586 552 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 PPP2CBP62714 309 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 PPP2CAP67775 309 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 IRX4P78413 519 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 PPP2R5EQ16537 467 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 ODF2Q5BJF6 829 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 TRIM61Q5EBN2 209 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 TFDP3Q5H9I0 405 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 TBC1D3GQ6DHY5 549 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 TBC1D3CQ6IPX1 549 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 TIGD7Q6NT04 549 aaPredicted RBP18.59■□□□□ 0.57
HLA-F-220ENST00000434407 TBC1D3Q8IZP1 549 aaPredicted RBP18.59■□□□□ 0.57
HLA-F-220ENST00000434407 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.59■□□□□ 0.57
HLA-F-220ENST00000434407 RAB7BQ96AH8 199 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 RBM41Q96IZ5 413 aaKnown RBP18.59■□□□□ 0.57
HLA-F-220ENST00000434407 NSMCE3Q96MG7 304 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 ZNF641Q96N77 438 aaPredicted RBP18.59■□□□□ 0.57
HLA-F-220ENST00000434407 OLFM3Q96PB7 478 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 TSGA10Q9BZW7 698 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 RXFP3Q9NSD7 469 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 SLC6A14Q9UN76 642 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 FADS3Q9Y5Q0 445 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 SLCO1B1Q9Y6L6 691 aa18.59■□□□□ 0.57
HLA-F-220ENST00000434407 TP53BP1Q12888 1972 aaPredicted RBP18.59■□□□□ 0.57
HLA-F-220ENST00000434407 hCG_1818297A0A087WSY0 165 aa18.58■□□□□ 0.56
HLA-F-220ENST00000434407 LNP1A1A4G5 178 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms