RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 RASSF4Q9H2L5 321 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 RHOJQ9H4E5 214 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 RETREG1Q9H6L5 497 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 ZNF395Q9H8N7 513 aaPredicted RBP19.77■□□□□ 0.76
VRK2-205ENST00000432057 IL23AQ9NPF7 189 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.77■□□□□ 0.76
VRK2-205ENST00000432057 SLC39A10Q9ULF5 831 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 PCDHB12Q9Y5F1 795 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 A0A096LPK6 155 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 A0A1B0GVM2 712 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 TCAF2A6NFQ2 919 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 H0YHG0 523 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 AHSGP02765 367 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 MPOP05164 745 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 ALDH3A1P30838 453 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 THOC5Q13769 683 aaKnown RBP19.77■□□□□ 0.76
VRK2-205ENST00000432057 CHST9Q7L1S5 443 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 NLRP9Q7RTR0 991 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 RAB3IL1Q8TBN0 382 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 ZNF398Q8TD17 642 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 IL21Q9HBE4 155 aa19.77■□□□□ 0.76
VRK2-205ENST00000432057 MTCL1Q9Y4B5 1905 aaKnown RBP19.77■□□□□ 0.76
VRK2-205ENST00000432057 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.76■□□□□ 0.75
VRK2-205ENST00000432057 A0A0G2JND7 137 aa19.76■□□□□ 0.75
VRK2-205ENST00000432057 CARNS1A5YM72 827 aa19.76■□□□□ 0.75
VRK2-205ENST00000432057 DNAJC8O75937 253 aaPredicted RBP19.76■□□□□ 0.75
VRK2-205ENST00000432057 HSPA1AP0DMV8 641 aaKnown RBP19.76■□□□□ 0.75
VRK2-205ENST00000432057 HSPA1BP0DMV9 641 aaKnown RBP19.76■□□□□ 0.75
VRK2-205ENST00000432057 NCALDP61601 193 aa19.76■□□□□ 0.75
VRK2-205ENST00000432057 SMAD3P84022 425 aaKnown RBP19.76■□□□□ 0.75
VRK2-205ENST00000432057 OCRLQ01968 901 aa19.76■□□□□ 0.75
VRK2-205ENST00000432057 BNIP1Q12981 228 aa19.76■□□□□ 0.75
VRK2-205ENST00000432057 ZNF177Q13360 481 aaPredicted RBP19.76■□□□□ 0.75
VRK2-205ENST00000432057 TSTD2Q5T7W7 516 aa19.76■□□□□ 0.75
VRK2-205ENST00000432057 ZNF470Q6ECI4 717 aa19.76■□□□□ 0.75
VRK2-205ENST00000432057 CLEC14AQ86T13 490 aa19.76■□□□□ 0.75
VRK2-205ENST00000432057 ERP27Q96DN0 273 aa19.76■□□□□ 0.75
VRK2-205ENST00000432057 C7orf26Q96N11 449 aa19.76■□□□□ 0.75
VRK2-205ENST00000432057 ECT2Q9H8V3 914 aa19.76■□□□□ 0.75
VRK2-205ENST00000432057 UBA2Q9UBT2 640 aaPredicted RBP19.76■□□□□ 0.75
VRK2-205ENST00000432057 DOCK6Q96HP0 2047 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 LOC285095A0A1B0GVY8 99 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 ILVBLA1L0T0 632 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 KDELR3O43731 214 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 SIN3BO75182 1162 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 DCTN3O75935 186 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 TGDSO95455 350 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 C2P06681 752 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 CNPP09543 421 aaKnown RBP19.75■□□□□ 0.75
VRK2-205ENST00000432057 LINC00271P0C7V0 271 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 FGF3P11487 239 aaPredicted RBP19.75■□□□□ 0.75
VRK2-205ENST00000432057 SAT1P21673 171 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 KCNA4P22459 653 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 PGGT1BP53609 377 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 SETDB1Q15047 1291 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 DBN1Q16643 649 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 UGP2Q16851 508 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 MBLAC2Q68D91 279 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 TXNDC8Q6A555 127 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 SLC41A1Q8IVJ1 513 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 ARL14EPQ8N8R7 260 aaPredicted RBP19.75■□□□□ 0.75
VRK2-205ENST00000432057 IFT43Q96FT9 208 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 TMEM120AQ9BXJ8 343 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 TGM5O43548 720 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 SNNO75324 88 aaPredicted RBP19.75■□□□□ 0.75
VRK2-205ENST00000432057 CTSAP10619 480 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 RGRP47804 291 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 CYP4F8P98187 520 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 CREMQ03060 361 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 GALNT3Q14435 633 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 ALG1LQ6GMV1 187 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 CXorf57Q6NSI4 855 aaKnown RBP19.75■□□□□ 0.75
VRK2-205ENST00000432057 ITIH5Q86UX2 942 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 HERC6Q8IVU3 1022 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 BBS5Q8N3I7 341 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 FIBCD1Q8N539 461 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 PPP1R14CQ8TAE6 165 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 ADAMTS19Q8TE59 1207 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 FEM1CQ96JP0 617 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 MGME1Q9BQP7 344 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 FAM167BQ9BTA0 163 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 CINPQ9BW66 212 aaPredicted RBP19.75■□□□□ 0.75
VRK2-205ENST00000432057 C20orf27Q9GZN8 174 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 KCNK13Q9HB14 408 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 SEPT3Q9UH03 358 aa19.75■□□□□ 0.75
VRK2-205ENST00000432057 PHGDHO43175 533 aaKnown RBP19.74■□□□□ 0.75
VRK2-205ENST00000432057 DLDP09622 509 aaKnown RBP19.74■□□□□ 0.75
VRK2-205ENST00000432057 AVPR1AP37288 418 aa19.74■□□□□ 0.75
VRK2-205ENST00000432057 CSRP3P50461 194 aa19.74■□□□□ 0.75
VRK2-205ENST00000432057 ARFIP2P53365 341 aa19.74■□□□□ 0.75
VRK2-205ENST00000432057 STX3Q13277 289 aa19.74■□□□□ 0.75
VRK2-205ENST00000432057 USP10Q14694 798 aaKnown RBP19.74■□□□□ 0.75
VRK2-205ENST00000432057 RNF219Q5W0B1 726 aaPredicted RBP19.74■□□□□ 0.75
VRK2-205ENST00000432057 SETD3Q86TU7 594 aaPredicted RBP19.74■□□□□ 0.75
VRK2-205ENST00000432057 C10orf107Q8IVU9 208 aa19.74■□□□□ 0.75
VRK2-205ENST00000432057 MFSD6LQ8IWD5 586 aa19.74■□□□□ 0.75
VRK2-205ENST00000432057 C2CD4AQ8NCU7 369 aaPredicted RBP19.74■□□□□ 0.75
VRK2-205ENST00000432057 OR13J1Q8NGT2 312 aa19.74■□□□□ 0.75
VRK2-205ENST00000432057 EXOC2Q96KP1 924 aa19.74■□□□□ 0.75
VRK2-205ENST00000432057 LRRC37BQ96QE4 947 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms