RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 SYNCRIPO60506 623 aaKnown RBP11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 H2AFYO75367 372 aaKnown RBP11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 HSPA1AP0DMV8 641 aaKnown RBP11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 HSPA1BP0DMV9 641 aaKnown RBP11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 LRPAP1P30533 357 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 PSMD8P48556 350 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 PTPN11Q06124 597 aaPredicted RBP11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 GRSF1Q12849 480 aaKnown RBP eCLIP11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 STX5Q13190 355 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 AQP6Q13520 282 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 PRPSAP1Q14558 356 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 ZNF460Q14592 562 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 MAPK11Q15759 364 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 SAPCD2Q86UD0 394 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 HTR3CQ8WXA8 447 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 SEPT8Q92599 483 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 DUS3LQ96G46 650 aaKnown RBP11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 FEM1CQ96JP0 617 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 QKIQ96PU8 341 aaKnown RBP eCLIP11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 CTRCQ99895 268 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 PDCD2LQ9BRP1 358 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 FAM49BQ9NUQ9 324 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 TMEM9Q9P0T7 183 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 SCHIP1Q9P0W5 487 aaPredicted RBP11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 MORF4L1Q9UBU8 362 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 VTI1BQ9UEU0 232 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 SEPT3Q9UH03 358 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 PSME2Q9UL46 239 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 TLL2Q9Y6L7 1015 aa11.2□□□□□ -0.62
SEMA4D-209ENST00000429836 A0A0A0MRY4 1105 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 DLX3O60479 287 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 SRP72O76094 671 aaKnown RBP11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 MPOP05164 745 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 YBX1P67809 324 aaKnown RBP11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 CAMK2BQ13554 666 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 ZIK1Q3SY52 487 aaPredicted RBP11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 BOLA3Q53S33 107 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 INTS11Q5TA45 600 aaKnown RBP11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 ARHGEF16Q5VV41 709 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 DHRSXQ8N5I4 330 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 MFSD3Q96ES6 412 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 SPATA13Q96N96 652 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 ZMAT2Q96NC0 199 aaKnown RBP11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 ZNF347Q96SE7 839 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 ARMC1Q9NVT9 282 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 DTLQ9NZJ0 730 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 RUVBL2Q9Y230 463 aaKnown RBP11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 TRIP11Q15643 1979 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 DHRS12A0PJE2 317 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 CLDN25C9JDP6 229 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 C9JVG2 144 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 MAFGO15525 162 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 CAP2P40123 477 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 NR4A2P43354 598 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 TMBIM6P55061 237 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 PIGFQ07326 219 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 NAB1Q13506 487 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 CYBRD1Q53TN4 286 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 SAMD4BQ5PRF9 694 aaKnown RBP11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 CNSTQ6PJW8 725 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 C14orf80Q86SX3 495 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 FAM35AQ86V20 835 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 FAM160B2Q86V87 743 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 CAPSLQ8WWF8 208 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 ISL2Q96A47 359 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 HEXIM2Q96MH2 286 aaKnown RBP11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 ZNF641Q96N77 438 aaPredicted RBP11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 PSD2Q9BQI7 771 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 BEGAINQ9BUH8 593 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 SEZ6LQ9BYH1 1024 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 IL22Q9GZX6 179 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 ADAMTS10Q9H324 1103 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 TNFRSF12AQ9NP84 129 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 MRPL40Q9NQ50 206 aaKnown RBP11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 AGPAT4Q9NRZ5 378 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 CCM2LQ9NUG4 571 aaPredicted RBP11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 TMEM181Q9P2C4 612 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 WARS2Q9UGM6 360 aaKnown RBP11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 KLHL3Q9UH77 587 aa11.19□□□□□ -0.62
SEMA4D-209ENST00000429836 PSME4Q14997 1843 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 RNF103O00237 685 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 AXIN1O15169 862 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 ACOX3O15254 700 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 XYLBO75191 536 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 PIGRP01833 764 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 MLNP12872 115 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 CAPGP40121 348 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 HLCSP50747 726 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 CLCQ05315 142 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 GRM3Q14832 879 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 ATP6AP1Q15904 470 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 C4orf22Q6V702 233 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 MCF2L2Q86YR7 1114 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 CDAN1Q8IWY9 1227 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 DDIASQ8IXT1 998 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 SP8Q8IXZ3 490 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 PYROXD2Q8N2H3 581 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 PELI3Q8N2H9 469 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 CLIP4Q8N3C7 705 aa11.18□□□□□ -0.62
SEMA4D-209ENST00000429836 FSTL5Q8N475 847 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms