RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 OGFRL1Q5TC84 451 aaPredicted RBP8.82□□□□□ -1
GABPB1-205ENST00000429662 RNF220Q5VTB9 566 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 BSPRYQ5W0U4 402 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 BEND5Q7L4P6 421 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 SPRED2Q7Z698 418 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 RSPH3Q86UC2 560 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 PGAM4Q8N0Y7 254 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 SCML4Q8N228 414 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 TMEM130Q8N3G9 435 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 ADCY4Q8NFM4 1077 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 OR6J1Q8NGC5 347 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 CCDC126Q96EE4 140 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 LRGUKQ96M69 825 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 FCRL3Q96P31 734 aaPredicted RBP8.82□□□□□ -1
GABPB1-205ENST00000429662 TRIM56Q9BRZ2 755 aaKnown RBP8.82□□□□□ -1
GABPB1-205ENST00000429662 MCMBPQ9BTE3 642 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 MED10Q9BTT4 135 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 EIF2AQ9BY44 585 aaKnown RBP8.82□□□□□ -1
GABPB1-205ENST00000429662 KATNBL1Q9H079 304 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 C20orf96Q9NUD7 363 aaPredicted RBP8.82□□□□□ -1
GABPB1-205ENST00000429662 TMEM39AQ9NV64 488 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 SLC38A7Q9NVC3 462 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 UTP6Q9NYH9 597 aaKnown RBP8.82□□□□□ -1
GABPB1-205ENST00000429662 CNOT11Q9UKZ1 510 aaKnown RBP8.82□□□□□ -1
GABPB1-205ENST00000429662 CDYLQ9Y232 598 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 TBC1D30Q9Y2I9 924 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 DTNAQ9Y4J8 743 aa8.82□□□□□ -1
GABPB1-205ENST00000429662 RIF1Q5UIP0 2472 aaKnown RBP8.82□□□□□ -1
GABPB1-205ENST00000429662 A0A087X1B8 175 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 EIF4E1BA6NMX2 242 aaKnown RBP8.81□□□□□ -1
GABPB1-205ENST00000429662 H0YJX3 145 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 GABRDO14764 452 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 DCXO43602 365 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 TOP3BO95985 862 aaKnown RBP8.81□□□□□ -1
GABPB1-205ENST00000429662 PGK1P00558 417 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 UBTFL6P0CB48 400 aaPredicted RBP8.81□□□□□ -1
GABPB1-205ENST00000429662 PAMP19021 973 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 PPARGP37231 505 aaPredicted RBP8.81□□□□□ -1
GABPB1-205ENST00000429662 TKTL1P51854 596 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 CHN2P52757 468 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 DAOAP59103 153 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 LILRA4P59901 499 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 DNAJB13P59910 316 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 NME3Q13232 169 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 TRIP10Q15642 601 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 RAB30Q15771 203 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 HSP90AA5PQ58FG0 334 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 OTUD1Q5VV17 481 aaPredicted RBP8.81□□□□□ -1
GABPB1-205ENST00000429662 DCLRE1AQ6PJP8 1040 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 BNC2Q6ZN30 1099 aaPredicted RBP8.81□□□□□ -1
GABPB1-205ENST00000429662 FRMD7Q6ZUT3 714 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 RAPH1Q70E73 1250 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 LRRC49Q8IUZ0 686 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 CNTN4Q8IWV2 1026 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 ALDH16A1Q8IZ83 802 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 PQLC1Q8N2U9 271 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 MARVELD2Q8N4S9 558 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 LZTR1Q8N653 840 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 POU5F2Q8N7G0 328 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 ZNF781Q8N8C0 355 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 RIN3Q8TB24 985 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 LRRN4Q8WUT4 740 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 PYDC1Q8WXC3 89 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 TOP1MTQ969P6 601 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 AZIN2Q96A70 460 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 VPS39Q96JC1 886 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 TEKT5Q96M29 485 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 AGAP3Q96P47 875 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 TUBGCP5Q96RT8 1024 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 GATA5Q9BWX5 397 aaPredicted RBP8.81□□□□□ -1
GABPB1-205ENST00000429662 SPATA16Q9BXB7 569 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 ACE2Q9BYF1 805 aaPredicted RBP8.81□□□□□ -1
GABPB1-205ENST00000429662 OSBPL2Q9H1P3 480 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 KCNH6Q9H252 994 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 ABHD16BQ9H3Z7 469 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 EBF3Q9H4W6 596 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 EFCAB1Q9HAE3 211 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.81□□□□□ -1
GABPB1-205ENST00000429662 ACOT9Q9Y305 439 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 MFHAS1Q9Y4C4 1052 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 TANC1Q9C0D5 1861 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 TET1Q8NFU7 2136 aa8.81□□□□□ -1
GABPB1-205ENST00000429662 BAHCC1Q9P281 2608 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 LOC100653049A0A140TA62 436 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 MYADML2A6NDP7 307 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 SPTLC1O15269 473 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 ZBTB24O43167 697 aaPredicted RBP8.8□□□□□ -1
GABPB1-205ENST00000429662 ADCY6O43306 1168 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 KRT34O76011 436 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 CAPNS1P04632 268 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 TFEBP19484 476 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 CCNCP24863 283 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 TKTP29401 623 aaKnown RBP8.8□□□□□ -1
GABPB1-205ENST00000429662 ALDH1A3P47895 512 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 GRIA4P48058 902 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 CXCR3P49682 368 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 CRYBB1P53674 252 aaPredicted RBP8.8□□□□□ -1
GABPB1-205ENST00000429662 GEMP55040 296 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 POLE2P56282 527 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 ART3Q13508 389 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms